Literature DB >> 17435008

Evidence that noncoding RNA dutA is a multicopy suppressor of Dictyostelium discoideum STAT protein Dd-STATa.

Nao Shimada1, Takefumi Kawata.   

Abstract

Dd-STATa, a Dictyostelium discoideum homologue of metazoan STAT transcription factors, is necessary for culmination. We created a mutant strain with partial Dd-STATa activity and used it to screen for unlinked suppressor genes. We screened approximately 450,000 clones from a slug-stage cDNA library for their ability to rescue the culmination defect when overexpressed. There were 12 multicopy suppressors of Dd-STATa, of which 4 encoded segments of a known noncoding RNA, dutA. Expression of dutA is specific to the pstA zone, the region where Dd-STATa is activated. In suppressed strains the expression patterns of several putative Dd-STATa target genes become similar to the wild-type strain. In addition, the amount of the tyrosine-phosphorylated form of Dd-STATa is significantly increased in the suppressed strain. These results indicate that partial copies of dutA may act upstream of Dd-STATa to regulate tyrosine phosphorylation by an unknown mechanism.

Entities:  

Mesh:

Substances:

Year:  2007        PMID: 17435008      PMCID: PMC1951520          DOI: 10.1128/EC.00035-07

Source DB:  PubMed          Journal:  Eukaryot Cell        ISSN: 1535-9786


  52 in total

Review 1.  Non-coding RNA genes and the modern RNA world.

Authors:  S R Eddy
Journal:  Nat Rev Genet       Date:  2001-12       Impact factor: 53.242

2.  An expanding universe of noncoding RNAs.

Authors:  Gisela Storz
Journal:  Science       Date:  2002-05-17       Impact factor: 47.728

3.  Changing patterns of gene expression in dictyostelium prestalk cell subtypes recognized by in situ hybridization with genes from microarray analyses.

Authors:  Mineko Maeda; Haruyo Sakamoto; Negin Iranfar; Danny Fuller; Toshinari Maruo; Satoshi Ogihara; Takahiro Morio; Hideko Urushihara; Yoshimasa Tanaka; William F Loomis
Journal:  Eukaryot Cell       Date:  2003-06

4.  Dynacortin contributes to cortical viscoelasticity and helps define the shape changes of cytokinesis.

Authors:  Kristine D Girard; Charles Chaney; Michael Delannoy; Scot C Kuo; Douglas N Robinson
Journal:  EMBO J       Date:  2004-03-11       Impact factor: 11.598

5.  7SK small nuclear RNA binds to and inhibits the activity of CDK9/cyclin T complexes.

Authors:  V T Nguyen; T Kiss; A A Michels; O Bensaude
Journal:  Nature       Date:  2001-11-15       Impact factor: 49.962

6.  RNAi in Dictyostelium: the role of RNA-directed RNA polymerases and double-stranded RNase.

Authors:  Henrik Martens; Jindrich Novotny; Jürgen Oberstrass; Theodore L Steck; Pamela Postlethwait; Wolfgang Nellen
Journal:  Mol Biol Cell       Date:  2002-02       Impact factor: 4.138

7.  Cleavage of Scarecrow-like mRNA targets directed by a class of Arabidopsis miRNA.

Authors:  Cesar Llave; Zhixin Xie; Kristin D Kasschau; James C Carrington
Journal:  Science       Date:  2002-09-20       Impact factor: 47.728

Review 8.  In search of antisense.

Authors:  Giovanni Lavorgna; Dvir Dahary; Ben Lehner; Rotem Sorek; Christopher M Sanderson; Giorgio Casari
Journal:  Trends Biochem Sci       Date:  2004-02       Impact factor: 13.807

9.  Structure of an activated Dictyostelium STAT in its DNA-unbound form.

Authors:  Montserrat Soler-Lopez; Carlo Petosa; Masashi Fukuzawa; Raimond Ravelli; Jeffrey G Williams; Christoph W Müller
Journal:  Mol Cell       Date:  2004-03-26       Impact factor: 17.970

Review 10.  Having it both ways: transcription factors that bind DNA and RNA.

Authors:  Laura A Cassiday; L James Maher
Journal:  Nucleic Acids Res       Date:  2002-10-01       Impact factor: 16.971

View more
  4 in total

Review 1.  Dictyostelium finds new roles to model.

Authors:  Jeffrey G Williams
Journal:  Genetics       Date:  2010-07       Impact factor: 4.562

2.  GBF-dependent family genes morphologically suppress the partially active Dictyostelium STATa strain.

Authors:  Nao Shimada; Naoko Kanno-Tanabe; Kakeru Minemura; Takefumi Kawata
Journal:  Dev Genes Evol       Date:  2008-01-18       Impact factor: 0.900

Review 3.  Noncoding RNA in development.

Authors:  Paulo P Amaral; John S Mattick
Journal:  Mamm Genome       Date:  2008-10-07       Impact factor: 2.957

4.  A Dictyostelium cellobiohydrolase orthologue that affects developmental timing.

Authors:  Mizuho Kunii; Mami Yasuno; Yuki Shindo; Takefumi Kawata
Journal:  Dev Genes Evol       Date:  2013-11-16       Impact factor: 0.900

  4 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.