Literature DB >> 15102435

In search of antisense.

Giovanni Lavorgna1, Dvir Dahary, Ben Lehner, Rotem Sorek, Christopher M Sanderson, Giorgio Casari.   

Abstract

In recent years, natural antisense transcripts (NATs) have been implicated in many aspects of eukaryotic gene expression including genomic imprinting, RNA interference, translational regulation, alternative splicing, X-inactivation and RNA editing. Moreover, there is growing evidence to suggest that antisense transcription might have a key role in a range of human diseases. Consequently, there have been several recent attempts to identify novel NATs. To date, approximately 2500 mammalian NATs have been found, indicating that antisense transcription might be a common mechanism of regulating gene expression in human cells. There are increasingly diverse ways in which antisense transcription can regulate gene expression and evidence for the involvement of NATs in human disease is emerging. A range of bioinformatic resources could be used to assist future antisense research.

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Year:  2004        PMID: 15102435     DOI: 10.1016/j.tibs.2003.12.002

Source DB:  PubMed          Journal:  Trends Biochem Sci        ISSN: 0968-0004            Impact factor:   13.807


  126 in total

1.  Regulation of Antisense Transcription by NuA4 Histone Acetyltransferase and Other Chromatin Regulatory Factors.

Authors:  Bhawana Uprety; Amala Kaja; Jannatul Ferdoush; Rwik Sen; Sukesh R Bhaumik
Journal:  Mol Cell Biol       Date:  2016-01-11       Impact factor: 4.272

2.  Transcriptional activation by bidirectional RNA polymerase II elongation over a silent promoter.

Authors:  Olivier Leupin; Catia Attanasio; Samuel Marguerat; Myriam Tapernoux; Stylianos E Antonarakis; Bernard Conrad
Journal:  EMBO Rep       Date:  2005-10       Impact factor: 8.807

3.  ECgene: genome-based EST clustering and gene modeling for alternative splicing.

Authors:  Namshin Kim; Seokmin Shin; Sanghyuk Lee
Journal:  Genome Res       Date:  2005-04       Impact factor: 9.043

Review 4.  Transcriptional interference--a crash course.

Authors:  Keith E Shearwin; Benjamin P Callen; J Barry Egan
Journal:  Trends Genet       Date:  2005-06       Impact factor: 11.639

5.  Primate-specific endogenous cis-antisense transcription in the human 5q31 protocadherin gene cluster.

Authors:  Leonard Lipovich; Ravi Raj Vanisri; Say Li Kong; Chin-Yo Lin; Edison T Liu
Journal:  J Mol Evol       Date:  2005-12-06       Impact factor: 2.395

6.  The length of the transcript encoded from the Kcnq1ot1 antisense promoter determines the degree of silencing.

Authors:  Chandrasekhar Kanduri; Noopur Thakur; Radha Raman Pandey
Journal:  EMBO J       Date:  2006-04-20       Impact factor: 11.598

Review 7.  Genome-wide natural antisense transcription: coupling its regulation to its different regulatory mechanisms.

Authors:  Michal Lapidot; Yitzhak Pilpel
Journal:  EMBO Rep       Date:  2006-12       Impact factor: 8.807

8.  A rice cis-natural antisense RNA acts as a translational enhancer for its cognate mRNA and contributes to phosphate homeostasis and plant fitness.

Authors:  Mehdi Jabnoune; David Secco; Cécile Lecampion; Christophe Robaglia; Qingyao Shu; Yves Poirier
Journal:  Plant Cell       Date:  2013-10-04       Impact factor: 11.277

9.  Natural antisense transcripts are co-expressed with sense mRNAs in synaptoneurosomes of adult mouse forebrain.

Authors:  Neil R Smalheiser; Giovanni Lugli; Vetle I Torvik; Nathan Mise; Rieko Ikeda; Kuniya Abe
Journal:  Neurosci Res       Date:  2008-09-04       Impact factor: 3.304

10.  The effect of temperature on Natural Antisense Transcript (NAT) expression in Aspergillus flavus.

Authors:  Carrie A Smith; Dominique Robertson; Bethan Yates; Dahlia M Nielsen; Doug Brown; Ralph A Dean; Gary A Payne
Journal:  Curr Genet       Date:  2008-09-24       Impact factor: 3.886

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