Literature DB >> 17434941

Entropic elasticity controls nanomechanics of single tropocollagen molecules.

Markus J Buehler1, Sophie Y Wong.   

Abstract

We report molecular modeling of stretching single molecules of tropocollagen, the building block of collagen fibrils and fibers that provide mechanical support in connective tissues. For small deformation, we observe a dominance of entropic elasticity. At larger deformation, we find a transition to energetic elasticity, which is characterized by first stretching and breaking of hydrogen bonds, followed by deformation of covalent bonds in the protein backbone, eventually leading to molecular fracture. Our force-displacement curves at small forces show excellent quantitative agreement with optical tweezer experiments. Our model predicts a persistence length xi(p) approximately 16 nm, confirming experimental results suggesting that tropocollagen molecules are very flexible elastic entities. We demonstrate that assembly of single tropocollagen molecules into fibrils significantly decreases their bending flexibility, leading to decreased contributions of entropic effects during deformation. The molecular simulation results are used to develop a simple continuum model capable of describing an entire deformation range of tropocollagen molecules. Our molecular model is capable of describing different regimes of elastic and permanent deformation, without relying on empirical parameters, including a transition from entropic to energetic elasticity.

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Year:  2007        PMID: 17434941      PMCID: PMC1914436          DOI: 10.1529/biophysj.106.102616

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  29 in total

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Authors:  I Jäger; P Fratzl
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2.  Stretching short biopolymers using optical tweezers.

Authors:  Y L Sun; Z P Luo; K N An
Journal:  Biochem Biophys Res Commun       Date:  2001-08-31       Impact factor: 3.575

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Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2002-02-28       Impact factor: 6.237

4.  Direct quantification of the flexibility of type I collagen monomer.

Authors:  Yu-Long Sun; Zong-Ping Luo; Andrzej Fertala; Kai-Nan An
Journal:  Biochem Biophys Res Commun       Date:  2002-07-12       Impact factor: 3.575

5.  Stretching type II collagen with optical tweezers.

Authors:  Yu-Long Sun; Zong-Ping Luo; Andrzej Fertala; Kai-Nan An
Journal:  J Biomech       Date:  2004-11       Impact factor: 2.712

Review 6.  Recent advances in the development and application of implicit solvent models in biomolecule simulations.

Authors:  Michael Feig; Charles L Brooks
Journal:  Curr Opin Struct Biol       Date:  2004-04       Impact factor: 6.809

7.  Structural models of osteogenesis imperfecta-associated variants in the COL1A1 gene.

Authors:  Sean D Mooney; Teri E Klein
Journal:  Mol Cell Proteomics       Date:  2002-11       Impact factor: 5.911

8.  Thermally labile domains in the collagen molecule.

Authors:  C A Miles; A J Bailey
Journal:  Micron       Date:  2001-04       Impact factor: 2.251

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Authors:  R Z Kramer; M G Venugopal; J Bella; P Mayville; B Brodsky; H M Berman
Journal:  J Mol Biol       Date:  2000-09-01       Impact factor: 5.469

10.  Conformational preferences of substituted prolines in the collagen triple helix.

Authors:  Sean D Mooney; Peter A Kollman; Teri E Klein
Journal:  Biopolymers       Date:  2002-07-05       Impact factor: 2.505

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  37 in total

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Journal:  Biophys J       Date:  2010-07-21       Impact factor: 4.033

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Journal:  Ann Biomed Eng       Date:  2012-07       Impact factor: 3.934

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Journal:  Biophys J       Date:  2008-03-21       Impact factor: 4.033

Review 4.  Deformation and failure of protein materials in physiologically extreme conditions and disease.

Authors:  Markus J Buehler; Yu Ching Yung
Journal:  Nat Mater       Date:  2009-03       Impact factor: 43.841

5.  Stress-strain experiments on individual collagen fibrils.

Authors:  Zhilei L Shen; Mohammad Reza Dodge; Harold Kahn; Roberto Ballarini; Steven J Eppell
Journal:  Biophys J       Date:  2008-07-18       Impact factor: 4.033

6.  Thermal memory in self-assembled collagen fibril networks.

Authors:  Martijn de Wild; Wim Pomp; Gijsje H Koenderink
Journal:  Biophys J       Date:  2013-07-02       Impact factor: 4.033

7.  Nanomechanics of collagen microfibrils.

Authors:  Simone Vesentini; Alberto Redaelli; Alfonso Gautieri
Journal:  Muscles Ligaments Tendons J       Date:  2013-05-21

8.  pH-induced contrast in viscoelasticity imaging of biopolymers.

Authors:  R D Yapp; M F Insana
Journal:  Phys Med Biol       Date:  2009-01-27       Impact factor: 3.609

9.  Single molecule effects of osteogenesis imperfecta mutations in tropocollagen protein domains.

Authors:  Alfonso Gautieri; Simone Vesentini; Alberto Redaelli; Markus J Buehler
Journal:  Protein Sci       Date:  2009-01       Impact factor: 6.725

10.  Collagen peptide simulated bending after applied axial deformation.

Authors:  Jonathan W Bourne; Lei Shi; Peter A Torzilli
Journal:  J Mech Behav Biomed Mater       Date:  2020-05-01
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