Literature DB >> 17426760

Three new satellite sequences and a mobile element found inside HSP70 introns of the Mediterranean mussel (Mytilus galloprovincialis).

Antonis Kourtidis1, Elena Drosopoulou, Chrysoula N Pantzartzi, Chariton C Chintiroglou, Zacharias G Scouras.   

Abstract

We report the characterization of 3 new repetitive sequences from the bivalve mollusc Mytilus galloprovincialis, designated Mg1, Mg2, and Mg3, with monomer lengths of 169, 260, and 70 bp, respectively. The 3 repeats together constitute approximately 7.8% of the M. galloprovincialis genome and were found, together with ApaI-type 2 repeats, inside the introns of 2 genes of the HSP70 family, hsc70 and hsc71. Both the monomer length and the genomic content of the repeats indicate satellite sequences. The Mg1 repetitive region and its flanking sequences exhibit significant homology to CvE, a member of the Pearl family of mobile elements found in the eastern oyster (Crassostrea virginica). Thus, the whole homologous region is designated MgE, the first putative transposable element characterized in M. galloprovincialis. The ApaI, Mg2, and Mg3 repeats are continuously arranged inside the introns of both the hsc70 and hsc71 genes. The presence of perfect inverted repeats flanking the ApaI-Mg2-Mg3 repetitive region, as well as a sequence analysis of the repeats, indicates a transposition-like insertion of this region. The genes of the HSP70 family are highly conserved, and the presence of repetitive DNA or of mobile elements inside their introns is reported here for the first time.

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Year:  2006        PMID: 17426760     DOI: 10.1139/g06-111

Source DB:  PubMed          Journal:  Genome        ISSN: 0831-2796            Impact factor:   2.166


  12 in total

Review 1.  Structural and functional liaisons between transposable elements and satellite DNAs.

Authors:  Nevenka Meštrović; Brankica Mravinac; Martina Pavlek; Tanja Vojvoda-Zeljko; Eva Šatović; Miroslav Plohl
Journal:  Chromosome Res       Date:  2015-09       Impact factor: 5.239

2.  Larval excretory-secretory products from the parasite Schistosoma mansoni modulate HSP70 protein expression in defence cells of its snail host, Biomphalaria glabrata.

Authors:  Zahida Zahoor; Angela J Davies; Ruth S Kirk; David Rollinson; Anthony John Walker
Journal:  Cell Stress Chaperones       Date:  2010-02-25       Impact factor: 3.667

3.  Two new miniature inverted-repeat transposable elements in the genome of the clam Donax trunculus.

Authors:  Eva Šatović; Miroslav Plohl
Journal:  Genetica       Date:  2017-06-26       Impact factor: 1.082

4.  Promoter complexity and tissue-specific expression of stress response components in Mytilus galloprovincialis, a sessile marine invertebrate species.

Authors:  Chrysa Pantzartzi; Elena Drosopoulou; Minas Yiangou; Ignat Drozdov; Sophia Tsoka; Christos A Ouzounis; Zacharias G Scouras
Journal:  PLoS Comput Biol       Date:  2010-07-08       Impact factor: 4.475

5.  RUDI, a short interspersed element of the V-SINE superfamily widespread in molluscan genomes.

Authors:  Andrea Luchetti; Eva Šatović; Barbara Mantovani; Miroslav Plohl
Journal:  Mol Genet Genomics       Date:  2016-03-17       Impact factor: 2.980

6.  Tandem repeat-containing MITEs in the clam Donax trunculus.

Authors:  Eva Satovic; Miroslav Plohl
Journal:  Genome Biol Evol       Date:  2013       Impact factor: 3.416

7.  DINE-1, the highest copy number repeats in Drosophila melanogaster are non-autonomous endonuclease-encoding rolling-circle transposable elements (Helentrons).

Authors:  Jainy Thomas; Komal Vadnagara; Ellen J Pritham
Journal:  Mob DNA       Date:  2014-06-04

8.  Adjacent sequences disclose potential for intra-genomic dispersal of satellite DNA repeats and suggest a complex network with transposable elements.

Authors:  Eva Satović; Tanja Vojvoda Zeljko; Andrea Luchetti; Barbara Mantovani; Miroslav Plohl
Journal:  BMC Genomics       Date:  2016-12-06       Impact factor: 3.969

9.  New insights into the genome repetitive fraction of the Antarctic bivalve Adamussium colbecki.

Authors:  Maria Assunta Biscotti; Marco Barucca; Adriana Canapa
Journal:  PLoS One       Date:  2018-03-28       Impact factor: 3.240

10.  Sequence Composition Underlying Centromeric and Heterochromatic Genome Compartments of the Pacific Oyster Crassostrea gigas.

Authors:  Monika Tunjić Cvitanić; Tanja Vojvoda Zeljko; Juan J Pasantes; Daniel García-Souto; Tena Gržan; Evelin Despot-Slade; Miroslav Plohl; Eva Šatović
Journal:  Genes (Basel)       Date:  2020-06-24       Impact factor: 4.096

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