Literature DB >> 1742365

How does the mRNA pass through the ribosome?

I N Shatsky1, A V Bakin, A A Bogdanov, V D Vasiliev.   

Abstract

A working model of the mRNA path through the ribosome is proposed. According to the model, the template goes around the small ribosomal subunit along the region where its 'head' is separated from other parts of the subunit. The 5'-end of the mRNA fragment covered by the ribosome is located near the 3'-terminus of 16S rRNA, whereas the 3'-terminal residues of the fragment are situated on the outer surface of the subunit, opposite its 'side ledge'. When associated with the 50S subunit, the 30S subunit is oriented in such a manner that the decoding center faces the L7/L12 stalk. Implications of the proposed working model of the mRNA topography for the function of the ribosome are discussed.

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Year:  1991        PMID: 1742365     DOI: 10.1016/0300-9084(91)90135-n

Source DB:  PubMed          Journal:  Biochimie        ISSN: 0300-9084            Impact factor:   4.079


  10 in total

Review 1.  Initiation of protein synthesis in bacteria.

Authors:  Brian Søgaard Laursen; Hans Peter Sørensen; Kim Kusk Mortensen; Hans Uffe Sperling-Petersen
Journal:  Microbiol Mol Biol Rev       Date:  2005-03       Impact factor: 11.056

2.  How are tRNAs and mRNA arranged in the ribosome? An attempt to correlate the stereochemistry of the tRNA-mRNA interaction with constraints imposed by the ribosomal topography.

Authors:  V Lim; C Venclovas; A Spirin; R Brimacombe; P Mitchell; F Müller
Journal:  Nucleic Acids Res       Date:  1992-06-11       Impact factor: 16.971

3.  A leaderless mRNA can bind to mammalian 80S ribosomes and direct polypeptide synthesis in the absence of translation initiation factors.

Authors:  Dmitri E Andreev; Ilya M Terenin; Yan E Dunaevsky; Sergei E Dmitriev; Ivan N Shatsky
Journal:  Mol Cell Biol       Date:  2006-04       Impact factor: 4.272

4.  Ribosomes bind leaderless mRNA in Escherichia coli through recognition of their 5'-terminal AUG.

Authors:  Jay E Brock; Soheil Pourshahian; Jacqueline Giliberti; Patrick A Limbach; Gary R Janssen
Journal:  RNA       Date:  2008-08-28       Impact factor: 4.942

5.  Contacts between 16S ribosomal RNA and mRNA, within the spacer region separating the AUG initiator codon and the Shine-Dalgarno sequence; a site-directed cross-linking study.

Authors:  J Rinke-Appel; N Jünke; R Brimacombe; I Lavrik; S Dokudovskaya; O Dontsova; A Bogdanov
Journal:  Nucleic Acids Res       Date:  1994-08-11       Impact factor: 16.971

6.  Post-termination complex disassembly by ribosome recycling factor, a functional tRNA mimic.

Authors:  Go Hirokawa; Michael C Kiel; Aiko Muto; Maria Selmer; V Samuel Raj; Anders Liljas; Kazuei Igarashi; Hideko Kaji; Akira Kaji
Journal:  EMBO J       Date:  2002-05-01       Impact factor: 11.598

7.  Interaction of mRNA with the Escherichia coli ribosome: accessibility of phosphorothioate-containing mRNA bound to ribosomes for iodine cleavage.

Authors:  E V Alexeeva; O V Shpanchenko; O A Dontsova; A A Bogdanov; K H Nierhaus
Journal:  Nucleic Acids Res       Date:  1996-06-15       Impact factor: 16.971

8.  Unusual ribosome binding properties of mRNA encoding bacteriophage lambda repressor.

Authors:  A G Balakin; E A Skripkin; I N Shatsky; A A Bogdanov
Journal:  Nucleic Acids Res       Date:  1992-02-11       Impact factor: 16.971

9.  Three widely separated positions in the 16S RNA lie in or close to the ribosomal decoding region; a site-directed cross-linking study with mRNA analogues.

Authors:  O Dontsova; S Dokudovskaya; A Kopylov; A Bogdanov; J Rinke-Appel; N Jünke; R Brimacombe
Journal:  EMBO J       Date:  1992-08       Impact factor: 11.598

10.  Molecular localization of a ribosome-dependent ATPase on Escherichia coli ribosomes.

Authors:  J Xu; M C Kiel; A Golshani; J G Chosay; H Aoki; M C Ganoza
Journal:  Nucleic Acids Res       Date:  2006-02-22       Impact factor: 16.971

  10 in total

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