Literature DB >> 17418444

When gene marriages don't work out: divorce by subfunctionalization.

Brian P Cusack1, Kenneth H Wolfe.   

Abstract

We describe how a bifunctional gene, encoding two proteins by alternative splicing, arose when the chloroplast gene RPL32 integrated into an intron of the nuclear gene SODcp in an ancestor of mangrove and poplar trees. Mangrove retains the alternatively spliced chimeric gene, but in poplar it underwent duplication and complete subfunctionalization, through complementary structural degeneration, to re-form separate RPL32 and SODcp genes.

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Year:  2007        PMID: 17418444     DOI: 10.1016/j.tig.2007.03.010

Source DB:  PubMed          Journal:  Trends Genet        ISSN: 0168-9525            Impact factor:   11.639


  68 in total

1.  Conservation of plastid sequences in the plant nuclear genome for millions of years facilitates endosymbiotic evolution.

Authors:  Mathieu Rousseau-Gueutin; Michael A Ayliffe; Jeremy N Timmis
Journal:  Plant Physiol       Date:  2011-10-27       Impact factor: 8.340

2.  Environmental stress increases the entry of cytoplasmic organellar DNA into the nucleus in plants.

Authors:  Dong Wang; Andrew H Lloyd; Jeremy N Timmis
Journal:  Proc Natl Acad Sci U S A       Date:  2012-01-30       Impact factor: 11.205

3.  Comprehensive expression analysis of rice phospholipase D gene family during abiotic stresses and development.

Authors:  Amarjeet Singh; Amita Pandey; Vinay Baranwal; Sanjay Kapoor; Girdhar K Pandey
Journal:  Plant Signal Behav       Date:  2012-07-01

4.  Localized hypermutation and associated gene losses in legume chloroplast genomes.

Authors:  Alan M Magee; Sue Aspinall; Danny W Rice; Brian P Cusack; Marie Sémon; Antoinette S Perry; Sasa Stefanović; Dan Milbourne; Susanne Barth; Jeffrey D Palmer; John C Gray; Tony A Kavanagh; Kenneth H Wolfe
Journal:  Genome Res       Date:  2010-10-26       Impact factor: 9.043

5.  Deeply conserved chordate noncoding sequences preserve genome synteny but do not drive gene duplicate retention.

Authors:  Andrew L Hufton; Susanne Mathia; Helene Braun; Udo Georgi; Hans Lehrach; Martin Vingron; Albert J Poustka; Georgia Panopoulou
Journal:  Genome Res       Date:  2009-08-24       Impact factor: 9.043

6.  Molecular characterization of Als1, an acetohydroxyacid synthase mutation conferring resistance to sulfonylurea herbicides in soybean.

Authors:  Cecilia Ghio; María Laura Ramos; Emiliano Altieri; Mariano Bulos; Carlos A Sala
Journal:  Theor Appl Genet       Date:  2013-10-16       Impact factor: 5.699

7.  Transcriptome analysis indicates considerable divergence in alternative splicing between duplicated genes in Arabidopsis thaliana.

Authors:  David C Tack; William R Pitchers; Keith L Adams
Journal:  Genetics       Date:  2014-10-16       Impact factor: 4.562

Review 8.  RNA decay, evolution, and the testis.

Authors:  Samantha H Jones; Miles Wilkinson
Journal:  RNA Biol       Date:  2016-12-02       Impact factor: 4.652

9.  Potential functional replacement of the plastidic acetyl-CoA carboxylase subunit (accD) gene by recent transfers to the nucleus in some angiosperm lineages.

Authors:  Mathieu Rousseau-Gueutin; Xun Huang; Emily Higginson; Michael Ayliffe; Anil Day; Jeremy N Timmis
Journal:  Plant Physiol       Date:  2013-02-22       Impact factor: 8.340

10.  The relationship among gene expression, the evolution of gene dosage, and the rate of protein evolution.

Authors:  Jean-François Gout; Daniel Kahn; Laurent Duret
Journal:  PLoS Genet       Date:  2010-05-13       Impact factor: 5.917

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