Literature DB >> 17416769

A systematic approach to analysing gene-gene interactions: polymorphisms at the microsomal epoxide hydrolase EPHX and glutathione S-transferase GSTM1, GSTT1, and GSTP1 loci and breast cancer risk.

Amanda B Spurdle1, Jiun-Horng Chang, Graham B Byrnes, Xiaoqing Chen, Gillian S Dite, Margaret R E McCredie, Graham G Giles, Melissa C Southey, Georgia Chenevix-Trench, John L Hopper.   

Abstract

OBJECTIVE: We undertook a case-control study in an Australian Caucasian population-based sample of 1,246 cases and 664 controls to assess the roles of detoxification gene polymorphisms EPHX T>C Tyr(113)His, GSTT1 deletion, GSTM1 deletion, and GSTP1 A>G Ile(105)Val on risk of breast cancer.
METHODS: We systematically addressed the main effects and possible gene-gene interactions using unconditional logistic regression to estimate odds ratios (OR) adjusted for potential confounders and using standard model building approaches based on likelihood theory.
RESULTS: There was a decreased risk associated with the EPHX CC genotype [OR, 0.60; 95% confidence interval (95% CI), 0.43-0.84; P = 0.003], marginally significant evidence of increased risk with GSTM1 null genotype (OR, 1.21; 95% CI, 1.00-1.47; P = 0.05), but no association with GSTT1 null genotype (OR, 1.12; 95% CI, 0.86-1.45; P = 0.4) or GSTP1 (OR, 0.95; 95% CI, 0.82-1.10; P = 0.5) genotype. The full model with all interactions gave a significantly better fit than a main-effects-only model (P < 0.001), providing evidence for gene-gene interactions. The most parsimonious model included main effects for EPHX, GSTT1, and GSTM1; a two-way interaction between EPHX and GSTM1; and a three-way interaction between EPHX, GSTM1, and GSTT1. Predicted risks were greatest for women carrying deletions of both GSTT1 and GSTM1, with either the EPHX TC genotype (OR, 2.02; 95% CI, 1.19-3.45; P = 0.009) or EPHX CC genotype (OR, 3.54; 95% CI, 1.29-9.72; P = 0.14).
CONCLUSION: Detoxification gene polymorphisms may interact with each other to result in small groups of individuals at modestly increased risk. We caution against overinterpretation and suggest that pooling of similarly large studies is needed to clarify the possible role of such complex gene-gene interactions on breast cancer risk. 2007;16(4):769-74).

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Year:  2007        PMID: 17416769     DOI: 10.1158/1055-9965.EPI-06-0776

Source DB:  PubMed          Journal:  Cancer Epidemiol Biomarkers Prev        ISSN: 1055-9965            Impact factor:   4.254


  17 in total

1.  Try113His and His139Arg polymorphisms in the microsomal epoxide hydrolase gene are not associated with risk of breast cancer.

Authors:  Wen-Feng Gong; Wen He; Qiu-Ming Zhang; Bang-De Xiang; Liang Ma; Shan Huang; Tao Bai; Jian-Hong Zhong; Le-Qun Li
Journal:  Tumour Biol       Date:  2014-05-20

2.  A meta-analysis of the association of glutathione S-transferase P1 gene polymorphism with the susceptibility of breast cancer.

Authors:  Jun-Jie Liu; Jin-Lu Liu; Xing Zhang; Lu Xie; Jian Zeng
Journal:  Mol Biol Rep       Date:  2013-01-19       Impact factor: 2.316

Review 3.  Microsomal epoxide hydrolase 1 (EPHX1): Gene, structure, function, and role in human disease.

Authors:  Radka Václavíková; David J Hughes; Pavel Souček
Journal:  Gene       Date:  2015-07-26       Impact factor: 3.688

4.  Genetic polymorphisms in the catechol estrogen metabolism pathway and breast cancer risk.

Authors:  Kerryn W Reding; Noel S Weiss; Chu Chen; Christopher I Li; Christopher S Carlson; Hui-Wen Wilkerson; Federico M Farin; Kenneth E Thummel; Janet R Daling; Kathleen E Malone
Journal:  Cancer Epidemiol Biomarkers Prev       Date:  2009-04-21       Impact factor: 4.254

5.  Log-Linear Models for Gene Association.

Authors:  Jianhua Hu; Adarsh Joshi; Valen E Johnson
Journal:  J Am Stat Assoc       Date:  2009       Impact factor: 5.033

6.  The common variant in the GSTM1 and GSTT1 genes is related to markers of oxidative stress and inflammation in patients with coronary artery disease: a case-only study.

Authors:  Jian-Jin Tang; Ming-Wei Wang; En-zhi Jia; Jian-Jun Yan; Qi-Ming Wang; Jun Zhu; Zhi-Jian Yang; Xiang Lu; Lian-sheng Wang
Journal:  Mol Biol Rep       Date:  2010-01       Impact factor: 2.316

7.  Glutathione S-transferase M1 and P1 polymorphisms and risk of breast cancer and fibrocystic breast conditions in Chinese women.

Authors:  Lori C Sakoda; Christie R Blackston; Kan Xue; Jennifer A Doherty; Roberta M Ray; Ming Gang Lin; Helge Stalsberg; Dao Li Gao; Ziding Feng; David B Thomas; Chu Chen
Journal:  Breast Cancer Res Treat       Date:  2007-07-12       Impact factor: 4.872

Review 8.  CYP1A1 and GSTP1 gene variations in breast cancer: a systematic review and case-control study.

Authors:  Sumaira Akhtar; Ishrat Mahjabeen; Zertashia Akram; Mahmood Akhtar Kayani
Journal:  Fam Cancer       Date:  2016-04       Impact factor: 2.375

9.  Meta-analysis of genetic polymorphisms in xenobiotic metabolizing enzymes and their association with breast cancer risk.

Authors:  Tajamul Hussain; Salman Alrokayan; Upadhyay Upasna; Manickam Pavithrakumari; Jaganathan Jayapriya; Vijay Kumar Kutala; Shaik Mohammad Naushad
Journal:  J Genet       Date:  2018-06       Impact factor: 1.166

10.  PAH-DNA adducts, cigarette smoking, GST polymorphisms, and breast cancer risk.

Authors:  Kathleen M McCarty; Regina M Santella; Susan E Steck; Rebecca J Cleveland; Jiyoung Ahn; Christine B Ambrosone; Kari North; Sharon K Sagiv; Sybil M Eng; Susan L Teitelbaum; Alfred I Neugut; Marilie D Gammon
Journal:  Environ Health Perspect       Date:  2008-12-10       Impact factor: 9.031

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