Literature DB >> 17416665

Characterization of a novel bifunctional dihydropteroate synthase/dihydropteroate reductase enzyme from Helicobacter pylori.

Itay Levin1, Moshe Mevarech, Bruce A Palfey.   

Abstract

Tetrahydrofolate is a ubiquitous C(1) carrier in many biosynthetic pathways in bacteria, importantly, in the biosynthesis of formylmethionyl tRNA(fMet), which is essential for the initiation of translation. The final step in the biosynthesis of tetrahydrofolate is carried out by the enzyme dihydrofolate reductase (DHFR). A search of the complete genome sequence of Helicobacter pylori failed to reveal any sequence that encodes DHFR. Previous studies demonstrated that the H. pylori dihydropteroate synthase gene folP can complement an Escherichia coli strain in which folA and folM, encoding two distinct DHFRs, are deleted. It was also shown that H. pylori FolP possesses an additional N-terminal domain that binds flavin mononucleotide (FMN). Homologous domains are found in FolP proteins of other microorganisms that do not possess DHFR. In this study, we demonstrated that H. pylori FolP is also a dihydropteroate reductase that derives its reducing power from soluble flavins, reduced FMN and reduced flavin adenine dinucleotide. We also determined the stoichiometry of the enzyme-bound flavin and showed that half of the bound flavin is exchangeable with the soluble flavins. Finally, site-directed mutagenesis of the most conserved amino acid residues in the N-terminal domain indicated the importance of these residues for the activity of the enzyme as a dihydropteroate reductase.

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Year:  2007        PMID: 17416665      PMCID: PMC1913416          DOI: 10.1128/JB.01878-06

Source DB:  PubMed          Journal:  J Bacteriol        ISSN: 0021-9193            Impact factor:   3.490


  17 in total

Review 1.  Reduced flavin: donor and acceptor enzymes and mechanisms of channeling.

Authors:  S C Tu
Journal:  Antioxid Redox Signal       Date:  2001-10       Impact factor: 8.401

2.  An alternative flavin-dependent mechanism for thymidylate synthesis.

Authors:  Hannu Myllykallio; Gerard Lipowski; Damien Leduc; Jonathan Filee; Patrick Forterre; Ursula Liebl
Journal:  Science       Date:  2002-05-23       Impact factor: 47.728

3.  Genetic evidence for a novel thymidylate synthase in the halophilic archaeon Halobacterium salinarum and in Campylobacter jejuni.

Authors:  Moshe Giladi; Gili Bitan-Banin; Moshe Mevarech; Ron Ortenberg
Journal:  FEMS Microbiol Lett       Date:  2002-10-29       Impact factor: 2.742

4.  Life without dihydrofolate reductase FolA.

Authors:  Hannu Myllykallio; Damien Leduc; Jonathan Filee; Ursula Liebl
Journal:  Trends Microbiol       Date:  2003-05       Impact factor: 17.079

5.  FolM, a new chromosomally encoded dihydrofolate reductase in Escherichia coli.

Authors:  Moshe Giladi; Neta Altman-Price; Itay Levin; Liat Levy; Moshe Mevarech
Journal:  J Bacteriol       Date:  2003-12       Impact factor: 3.490

Review 6.  Searching sequence space: two different approaches to dihydrofolate reductase catalysis.

Authors:  Elizabeth E Howell
Journal:  Chembiochem       Date:  2005-04       Impact factor: 3.164

7.  One-step inactivation of chromosomal genes in Escherichia coli K-12 using PCR products.

Authors:  K A Datsenko; B L Wanner
Journal:  Proc Natl Acad Sci U S A       Date:  2000-06-06       Impact factor: 11.205

8.  Purification and properties of Lactobacillus casei folylpoly-gamma-glutamate synthetase.

Authors:  A L Bognar; B Shane
Journal:  J Biol Chem       Date:  1983-10-25       Impact factor: 5.157

9.  Crystal structures of Escherichia coli and Lactobacillus casei dihydrofolate reductase refined at 1.7 A resolution. I. General features and binding of methotrexate.

Authors:  J T Bolin; D J Filman; D A Matthews; R C Hamlin; J Kraut
Journal:  J Biol Chem       Date:  1982-11-25       Impact factor: 5.157

10.  Mechanistic studies of a flavin-dependent thymidylate synthase.

Authors:  Nitish Agrawal; Scott A Lesley; Peter Kuhn; Amnon Kohen
Journal:  Biochemistry       Date:  2004-08-17       Impact factor: 3.162

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  7 in total

1.  A 5-formyltetrahydrofolate cycloligase paralog from all domains of life: comparative genomic and experimental evidence for a cryptic role in thiamin metabolism.

Authors:  Anne Pribat; Ian K Blaby; Aurora Lara-Núñez; Linda Jeanguenin; Romain Fouquet; Océane Frelin; Jesse F Gregory; Benjamin Philmus; Tadhg P Begley; Valérie de Crécy-Lagard; Andrew D Hanson
Journal:  Funct Integr Genomics       Date:  2011-05-03       Impact factor: 3.410

2.  Use of thermal melt curves to assess the quality of enzyme preparations.

Authors:  Gregory J Crowther; Panqing He; Philip P Rodenbough; Andrew P Thomas; Kuzma V Kovzun; David J Leibly; Janhavi Bhandari; Lisa J Castaneda; Wim G J Hol; Michael H Gelb; Alberto J Napuli; Wesley C Van Voorhis
Journal:  Anal Biochem       Date:  2009-12-14       Impact factor: 3.365

3.  Room temperature synthesis and antibacterial activity of new sulfonamides containing n,n-diethyl-substituted amido moieties.

Authors:  Olayinka O Ajani; Oluwole B Familoni; Feipeng Wu; Johnbull O Echeme; Zheng Sujiang
Journal:  Int J Med Chem       Date:  2012-10-17

Review 4.  Metabolism of halophilic archaea.

Authors:  Michaela Falb; Kerstin Müller; Lisa Königsmaier; Tanja Oberwinkler; Patrick Horn; Susanne von Gronau; Orland Gonzalez; Friedhelm Pfeiffer; Erich Bornberg-Bauer; Dieter Oesterhelt
Journal:  Extremophiles       Date:  2008-02-16       Impact factor: 2.395

5.  Comparative genomics of bacterial and plant folate synthesis and salvage: predictions and validations.

Authors:  Valérie de Crécy-Lagard; Basma El Yacoubi; Rocío Díaz de la Garza; Alexandre Noiriel; Andrew D Hanson
Journal:  BMC Genomics       Date:  2007-07-23       Impact factor: 3.969

6.  Complete genome sequence of the extremely acidophilic methanotroph isolate V4, Methylacidiphilum infernorum, a representative of the bacterial phylum Verrucomicrobia.

Authors:  Shaobin Hou; Kira S Makarova; Jimmy H W Saw; Pavel Senin; Benjamin V Ly; Zhemin Zhou; Yan Ren; Jianmei Wang; Michael Y Galperin; Marina V Omelchenko; Yuri I Wolf; Natalya Yutin; Eugene V Koonin; Matthew B Stott; Bruce W Mountain; Michelle A Crowe; Angela V Smirnova; Peter F Dunfield; Lu Feng; Lei Wang; Maqsudul Alam
Journal:  Biol Direct       Date:  2008-07-01       Impact factor: 4.540

Review 7.  Variations in metabolic pathways create challenges for automated metabolic reconstructions: Examples from the tetrahydrofolate synthesis pathway.

Authors:  Valérie de Crécy-Lagard
Journal:  Comput Struct Biotechnol J       Date:  2014-06-11       Impact factor: 7.271

  7 in total

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