Literature DB >> 17415726

The mechanism of RNA strand scission: an experimental measure of the Brønsted coefficient, beta nuc.

Jing-Dong Ye1, Nan-Sheng Li, Qing Dai, Joseph A Piccirilli.   

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Year:  2007        PMID： 17415726     DOI： 10.1002/anie.200605124

Source DB:  PubMed          Journal:  Angew Chem Int Ed Engl        ISSN： 1433-7851            Impact factor:   15.336


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  10 in total

1.  Combined Approaches to Site-Specific Modification of RNA.

Authors:  Christine S Chow; Santosh K Mahto; Tek N Lamichhane
Journal:  ACS Chem Biol       Date:  2008-01-05       Impact factor: 5.100

Review 2.  Integration of kinetic isotope effect analyses to elucidate ribonuclease mechanism.

Authors:  Michael E Harris; Joseph A Piccirilli; Darrin M York
Journal:  Biochim Biophys Acta       Date:  2015-04-30

3.  Mechanistic evidence for a front-side, SNi-type reaction in a retaining glycosyltransferase.

Authors:  Seung Seo Lee; Sung You Hong; James C Errey; Atsushi Izumi; Gideon J Davies; Benjamin G Davis
Journal:  Nat Chem Biol       Date:  2011-08-07       Impact factor: 15.040

Review 4.  Altered (transition) states: mechanisms of solution and enzyme catalyzed RNA 2'-O-transphosphorylation.

Authors:  Daniel L Kellerman; Darrin M York; Joseph A Piccirilli; Michael E Harris
Journal:  Curr Opin Chem Biol       Date:  2014-07-12       Impact factor: 8.822

5.  Transition State Features in the Hepatitis Delta Virus Ribozyme Reaction Revealed by Atomic Perturbations.

Authors:  Selene C Koo; Jun Lu; Nan-Sheng Li; Edward Leung; Subha R Das; Michael E Harris; Joseph A Piccirilli
Journal:  J Am Chem Soc       Date:  2015-07-14       Impact factor: 15.419

6.  Experimental and computational analysis of the transition state for ribonuclease A-catalyzed RNA 2'-O-transphosphorylation.

Authors:  Hong Gu; Shuming Zhang; Kin-Yiu Wong; Brian K Radak; Thakshila Dissanayake; Daniel L Kellerman; Qing Dai; Masaru Miyagi; Vernon E Anderson; Darrin M York; Joseph A Piccirilli; Michael E Harris
Journal:  Proc Natl Acad Sci U S A       Date:  2013-07-22       Impact factor: 11.205

7.  Investigation of the pKa of the Nucleophilic O2' of the Hairpin Ribozyme.

Authors:  Andrew J Veenis; Pengfei Li; Alexander V Soudackov; Sharon Hammes-Schiffer; Philip C Bevilacqua
Journal:  J Phys Chem B       Date:  2021-10-25       Impact factor: 2.991

8.  Structure-Activity Relationships in Nonenzymatic Template-Directed RNA Synthesis.

Authors:  Constantin Giurgiu; Ziyuan Fang; Harry R M Aitken; Seohyun Chris Kim; Lydia Pazienza; Shriyaa Mittal; Jack W Szostak
Journal:  Angew Chem Int Ed Engl       Date:  2021-09-14       Impact factor: 16.823

9.  Assessment of metal-assisted nucleophile activation in the hepatitis delta virus ribozyme from molecular simulation and 3D-RISM.

Authors:  Brian K Radak; Tai-Sung Lee; Michael E Harris; Darrin M York
Journal:  RNA       Date:  2015-07-13       Impact factor: 4.942

Review 10.  Phosphodiester models for cleavage of nucleic acids.

Authors:  Satu Mikkola; Tuomas Lönnberg; Harri Lönnberg
Journal:  Beilstein J Org Chem       Date:  2018-04-10       Impact factor: 2.883
  10 in total

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