Literature DB >> 17409089

Variance of the parental genome contribution to inbred lines derived from biparental crosses.

Matthias Frisch1, Albrecht E Melchinger.   

Abstract

The expectation of the parental genome contribution to inbred lines derived from biparental crosses or backcrosses is well known, but no theoretical results exist for its variance. Our objective was to derive the variance of the parental genome contribution to inbred lines developed by the single-seed descent or double haploid method from biparental crosses or backcrosses. We derived formulas and tabulated results for the variance of the parental genome contribution depending on the chromosome lengths and the mating scheme used for inbred line development. A normal approximation of the probability distribution function of the parental genome contribution fitted well the exact distribution obtained from computer simulations. We determined upper and lower quantiles of the parental genome contribution for model genomes of sugar beet, maize, and wheat using normal approximations. These can be employed to detect essentially derived varieties in the context of plant variety protection. Furthermore, we outlined the application of our results to predict the response to selection. Our results on the variance of the parental genome contribution can assist breeders and geneticists in the design of experiments or breeding programs by assessing the variation around the mean parental genome contribution for alternative crossing schemes.

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Year:  2007        PMID: 17409089      PMCID: PMC1893034          DOI: 10.1534/genetics.106.065433

Source DB:  PubMed          Journal:  Genetics        ISSN: 0016-6731            Impact factor:   4.562


  6 in total

1.  The length of the intact donor chromosome segment around a target gene in marker-assisted backcrossing.

Authors:  M Frisch; A E Melchinger
Journal:  Genetics       Date:  2001-03       Impact factor: 4.562

2.  Selection theory for marker-assisted backcrossing.

Authors:  Matthias Frisch; Albrecht E Melchinger
Journal:  Genetics       Date:  2005-03-31       Impact factor: 4.562

3.  Identification of essentially derived varieties with molecular markers: an approach based on statistical test theory and computer simulations.

Authors:  M Heckenberger; M Bohn; M Frisch; H P Maurer; A E Melchinger
Journal:  Theor Appl Genet       Date:  2005-05-26       Impact factor: 5.699

4.  Marker-based prediction of the parental genome contribution to inbred lines derived from biparental crosses.

Authors:  Matthias Frisch; Albrecht E Melchinger
Journal:  Genetics       Date:  2006-08-03       Impact factor: 4.562

5.  Interference in Genetic Crossing over and Chromosome Mapping.

Authors:  P Stam
Journal:  Genetics       Date:  1979-06       Impact factor: 4.562

6.  Modeling interference in genetic recombination.

Authors:  M S McPeek; T P Speed
Journal:  Genetics       Date:  1995-02       Impact factor: 4.562

  6 in total
  7 in total

1.  QTL mapping under truncation selection in homozygous lines derived from biparental crosses.

Authors:  Albrecht E Melchinger; Elena Orsini; Chris C Schön
Journal:  Theor Appl Genet       Date:  2011-11-01       Impact factor: 5.699

2.  Variation of the parental genome contribution in segregating populations derived from biparental crosses and its relationship with heterosis of their Design III progenies.

Authors:  Albrecht E Melchinger; Baldev S Dhillon; Xuefei Mi
Journal:  Theor Appl Genet       Date:  2009-11-13       Impact factor: 5.699

3.  Shrinkage estimation of the genomic relationship matrix can improve genomic estimated breeding values in the training set.

Authors:  Dominik Müller; Frank Technow; Albrecht E Melchinger
Journal:  Theor Appl Genet       Date:  2015-03-04       Impact factor: 5.699

4.  Efficiency gain of marker-assisted backcrossing by sequentially increasing marker densities over generations.

Authors:  Vanessa Prigge; Albrecht E Melchinger; Baldev S Dhillon; Matthias Frisch
Journal:  Theor Appl Genet       Date:  2009-04-29       Impact factor: 5.699

5.  Genomic selection of crossing partners on basis of the expected mean and variance of their derived lines.

Authors:  Tanja Osthushenrich; Matthias Frisch; Eva Herzog
Journal:  PLoS One       Date:  2017-12-04       Impact factor: 3.240

6.  Usefulness Criterion and Post-selection Parental Contributions in Multi-parental Crosses: Application to Polygenic Trait Introgression.

Authors:  Antoine Allier; Laurence Moreau; Alain Charcosset; Simon Teyssèdre; Christina Lehermeier
Journal:  G3 (Bethesda)       Date:  2019-05-07       Impact factor: 3.154

7.  Identifying Parameters for Defining "Essentially Derived Varieties" of Maize Inbred Lines Using High-Throughput Genome-Wide SNP Markers.

Authors:  Yuanyuan Yan; Shanqiu Sun; Ruixia Xing; Haiyang Jiang; Beijiu Cheng
Journal:  Plants (Basel)       Date:  2022-07-23
  7 in total

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