Literature DB >> 17408689

Defining how ubiquitin receptors hHR23a and S5a bind polyubiquitin.

Yang Kang1, Xiang Chen, Jeffrey W Lary, James L Cole, Kylie J Walters.   

Abstract

Ubiquitin receptors connect substrate ubiquitylation to proteasomal degradation. HHR23a binds proteasome subunit 5a (S5a) through a surface that also binds ubiquitin. We report that UIM2 of S5a binds preferentially to hHR23a over polyubiquitin, and we provide a model for the ternary complex that we expect represents one of the mechanisms used by the proteasome to capture ubiquitylated substrates. Furthermore, we demonstrate that hHR23a is surprisingly adept at sequestering the ubiquitin moieties of a polyubiquitin chain, and provide evidence that it and the ubiquitylated substrate are committed to each other after binding.

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Year:  2007        PMID: 17408689      PMCID: PMC3864866          DOI: 10.1016/j.jmb.2007.03.008

Source DB:  PubMed          Journal:  J Mol Biol        ISSN: 0022-2836            Impact factor:   5.469


  41 in total

1.  Proteasome inhibitors alter the orderly progression of DNA synthesis during S-phase in HeLa cells and lead to rereplication of DNA.

Authors:  R Yamaguchi; A Dutta
Journal:  Exp Cell Res       Date:  2000-11-25       Impact factor: 3.905

2.  A proteasomal ATPase subunit recognizes the polyubiquitin degradation signal.

Authors:  Y Amy Lam; T Glen Lawson; Murugesan Velayutham; Jay L Zweier; Cecile M Pickart
Journal:  Nature       Date:  2002-04-18       Impact factor: 49.962

3.  Proteasome subunit Rpn1 binds ubiquitin-like protein domains.

Authors:  Suzanne Elsasser; Rayappa R Gali; Martin Schwickart; Christopher N Larsen; David S Leggett; Britta Müller; Matthew T Feng; Fabian Tübing; Gunnar A G Dittmar; Daniel Finley
Journal:  Nat Cell Biol       Date:  2002-09       Impact factor: 28.824

4.  The DNA damage-inducible UbL-UbA protein Ddi1 participates in Mec1-mediated degradation of Ho endonuclease.

Authors:  Ludmila Kaplun; Regina Tzirkin; Anya Bakhrat; Nitzan Shabek; Yelena Ivantsiv; Dina Raveh
Journal:  Mol Cell Biol       Date:  2005-07       Impact factor: 4.272

5.  Developmental defects and male sterility in mice lacking the ubiquitin-like DNA repair gene mHR23B.

Authors:  Jessica M Y Ng; Harry Vrieling; Kaoru Sugasawa; Marja P Ooms; J Anton Grootegoed; Jan T M Vreeburg; Pim Visser; Rudolph B Beems; Theo G M F Gorgels; Fumio Hanaoka; Jan H J Hoeijmakers; Gijsbertus T J van der Horst
Journal:  Mol Cell Biol       Date:  2002-02       Impact factor: 4.272

6.  The program XEASY for computer-supported NMR spectral analysis of biological macromolecules.

Authors:  C Bartels; T H Xia; M Billeter; P Güntert; K Wüthrich
Journal:  J Biomol NMR       Date:  1995-07       Impact factor: 2.835

7.  NMRPipe: a multidimensional spectral processing system based on UNIX pipes.

Authors:  F Delaglio; S Grzesiek; G W Vuister; G Zhu; J Pfeifer; A Bax
Journal:  J Biomol NMR       Date:  1995-11       Impact factor: 2.835

8.  Structure of tetraubiquitin shows how multiubiquitin chains can be formed.

Authors:  W J Cook; L C Jeffrey; E Kasperek; C M Pickart
Journal:  J Mol Biol       Date:  1994-02-18       Impact factor: 5.469

9.  Rad23 and Rpn10 serve as alternative ubiquitin receptors for the proteasome.

Authors:  Suzanne Elsasser; Devin Chandler-Militello; Britta Müller; John Hanna; Daniel Finley
Journal:  J Biol Chem       Date:  2004-04-26       Impact factor: 5.157

10.  Rad23 promotes the targeting of proteolytic substrates to the proteasome.

Authors:  Li Chen; Kiran Madura
Journal:  Mol Cell Biol       Date:  2002-07       Impact factor: 4.272

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  20 in total

1.  Human cytomegalovirus UL76 elicits novel aggresome formation via interaction with S5a of the ubiquitin proteasome system.

Authors:  Shin-Rung Lin; Meei Jyh Jiang; Hung-Hsueh Wang; Cheng-Hui Hu; Ming-Shan Hsu; Edward Hsi; Chang-Yih Duh; Shang-Kwei Wang
Journal:  J Virol       Date:  2013-08-21       Impact factor: 5.103

Review 2.  Multitasking with ubiquitin through multivalent interactions.

Authors:  Fen Liu; Kylie J Walters
Journal:  Trends Biochem Sci       Date:  2010-02-22       Impact factor: 13.807

3.  Polyubiquitin-Photoactivatable Crosslinking Reagents for Mapping Ubiquitin Interactome Identify Rpn1 as a Proteasome Ubiquitin-Associating Subunit.

Authors:  Michal Chojnacki; Wissam Mansour; Dharjath S Hameed; Rajesh K Singh; Farid El Oualid; Rina Rosenzweig; Mark A Nakasone; Zanlin Yu; Fabian Glaser; Lewis E Kay; David Fushman; Huib Ovaa; Michael H Glickman
Journal:  Cell Chem Biol       Date:  2017-03-16       Impact factor: 8.116

Review 4.  Ubiquitin-binding domains - from structures to functions.

Authors:  Ivan Dikic; Soichi Wakatsuki; Kylie J Walters
Journal:  Nat Rev Mol Cell Biol       Date:  2009-10       Impact factor: 94.444

5.  (1)H, (15)N, (13)C resonance assignments for Saccharomyces cerevisiae Rad23 UBL domain.

Authors:  Xiang Chen; Kylie J Walters
Journal:  Biomol NMR Assign       Date:  2016-05-17       Impact factor: 0.746

Review 6.  Recognition and processing of ubiquitin-protein conjugates by the proteasome.

Authors:  Daniel Finley
Journal:  Annu Rev Biochem       Date:  2009       Impact factor: 23.643

7.  Together, Rpn10 and Dsk2 can serve as a polyubiquitin chain-length sensor.

Authors:  Daoning Zhang; Tony Chen; Inbal Ziv; Rina Rosenzweig; Yulia Matiuhin; Vered Bronner; Michael H Glickman; David Fushman
Journal:  Mol Cell       Date:  2009-12-25       Impact factor: 17.970

8.  Structure of the s5a:k48-linked diubiquitin complex and its interactions with rpn13.

Authors:  Naixia Zhang; Qinghua Wang; Aaron Ehlinger; Leah Randles; Jeffrey W Lary; Yang Kang; Aydin Haririnia; Andrew J Storaska; James L Cole; David Fushman; Kylie J Walters
Journal:  Mol Cell       Date:  2009-08-14       Impact factor: 17.970

9.  Characterization of Dynamic UbR-Proteasome Subcomplexes by In vivo Cross-linking (X) Assisted Bimolecular Tandem Affinity Purification (XBAP) and Label-free Quantitation.

Authors:  Clinton Yu; Yingying Yang; Xiaorong Wang; Shenheng Guan; Lei Fang; Fen Liu; Kylie J Walters; Peter Kaiser; Lan Huang
Journal:  Mol Cell Proteomics       Date:  2016-04-25       Impact factor: 5.911

10.  Positive selection for the male functionality of a co-retroposed gene in the hominoids.

Authors:  Yong Zhang; Shujuan Lu; Shuqi Zhao; Xiaofeng Zheng; Manyuan Long; Liping Wei
Journal:  BMC Evol Biol       Date:  2009-10-15       Impact factor: 3.260

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