Literature DB >> 17401213

Expression and purification of F-plasmid RepE and preliminary X-ray crystallographic study of its complex with operator DNA.

Akira Nakamura1, Chieko Wada, Kunio Miki.   

Abstract

The replication initiator factor RepE of the F plasmid in Escherichia coli is an essential protein that stringently regulates the F-plasmid copy number. The RepE protein has a dual function: its monomer functions as a replication initiator, while its dimer acts as a transcriptional repressor of the repE gene. The wild-type dimeric RepE protein was expressed as an N-terminal histidine-tagged protein, purified under native conditions with a high salt concentration and crystallized in complex with the repE operator DNA using the sitting-drop vapour-diffusion technique. The crystals diffracted to a resolution of 3.14 A after the application of dehydration and crystal annealing and belong to space group P2(1), with unit-cell parameters a = 60.73, b = 99.32, c = 95.00 A, beta = 108.55 degrees.

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Year:  2007        PMID: 17401213      PMCID: PMC2330221          DOI: 10.1107/S1744309107012894

Source DB:  PubMed          Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun        ISSN: 1744-3091


  21 in total

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Journal:  Acta Crystallogr D Biol Crystallogr       Date:  1994-07-01

Review 2.  Post-crystallization treatments for improving diffraction quality of protein crystals.

Authors:  Begoña Heras; Jennifer L Martin
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2005-08-16

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Journal:  J Biol Chem       Date:  1992-06-05       Impact factor: 5.157

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Journal:  Mol Gen Genet       Date:  1996-11-27

5.  Mechanism of autonomous control of the Escherichia coli F plasmid: purification and characterization of the repE gene product.

Authors:  L Masson; D S Ray
Journal:  Nucleic Acids Res       Date:  1988-01-25       Impact factor: 16.971

6.  Solvent content of protein crystals.

Authors:  B W Matthews
Journal:  J Mol Biol       Date:  1968-04-28       Impact factor: 5.469

7.  Roles of Escherichia coli heat shock proteins DnaK, DnaJ and GrpE in mini-F plasmid replication.

Authors:  Y Kawasaki; C Wada; T Yura
Journal:  Mol Gen Genet       Date:  1990-01

8.  Replication initiator protein RepE of mini-F plasmid: functional differentiation between monomers (initiator) and dimers (autogenous repressor).

Authors:  M Ishiai; C Wada; Y Kawasaki; T Yura
Journal:  Proc Natl Acad Sci U S A       Date:  1994-04-26       Impact factor: 11.205

9.  Two functions of the E protein are key elements in the plasmid F replication control system.

Authors:  L A Rokeach; L Søgaard-Andersen; S Molin
Journal:  J Bacteriol       Date:  1985-12       Impact factor: 3.490

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Authors:  Y Kawasaki; C Wada; T Yura
Journal:  J Bacteriol       Date:  1991-02       Impact factor: 3.490

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  6 in total

1.  Measurement of the equilibrium relative humidity for common precipitant concentrations: facilitating controlled dehydration experiments.

Authors:  Matthew J Wheeler; Silvia Russi; Michael G Bowler; Matthew W Bowler
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2011-12-24

2.  Structural basis for regulation of bifunctional roles in replication initiator protein.

Authors:  Akira Nakamura; Chieko Wada; Kunio Miki
Journal:  Proc Natl Acad Sci U S A       Date:  2007-11-13       Impact factor: 11.205

3.  Increasing the X-ray diffraction power of protein crystals by dehydration: the case of bovine serum albumin and a survey of literature data.

Authors:  Irene Russo Krauss; Filomena Sica; Carlo Andrea Mattia; Antonello Merlino
Journal:  Int J Mol Sci       Date:  2012-03-21       Impact factor: 6.208

4.  Raoult's law revisited: accurately predicting equilibrium relative humidity points for humidity control experiments.

Authors:  Michael G Bowler; David R Bowler; Matthew W Bowler
Journal:  J Appl Crystallogr       Date:  2017-03-29       Impact factor: 3.304

Review 5.  Membrane protein structure determination - the next generation.

Authors:  Isabel Moraes; Gwyndaf Evans; Juan Sanchez-Weatherby; Simon Newstead; Patrick D Shaw Stewart
Journal:  Biochim Biophys Acta       Date:  2013-07-13

Review 6.  Replisome Assembly at Bacterial Chromosomes and Iteron Plasmids.

Authors:  Katarzyna E Wegrzyn; Marta Gross; Urszula Uciechowska; Igor Konieczny
Journal:  Front Mol Biosci       Date:  2016-08-11
  6 in total

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