Literature DB >> 17384226

Computational design and biochemical characterization of maize nonspecific lipid transfer protein variants for biosensor applications.

Eun Jung Choi1, Jessica Mao, Stephen L Mayo.   

Abstract

Lipid transfer proteins (LTPs) are a family of proteins that bind and transfer lipids. Utilizing the maize LTP, we have successfully engineered fluorescent reagentless biosensors for the natural ligand of LTPs; this was achieved by using computational protein design to remove a disulfide bridge and attaching a thio-reactive fluorophore. Conformational change induced by ligand titration is thought to affect the fluorescence of the fluorophore, allowing detection of ligand binding. Fluorescence measurements show that our LTP variants have affinity to palmitate that is consistent with wild-type LTP. These molecules have the potential to be utilized as scaffolds to design hydrophobic ligand biosensors or to serve as drug carriers.

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Year:  2007        PMID: 17384226      PMCID: PMC2203350          DOI: 10.1110/ps.062607007

Source DB:  PubMed          Journal:  Protein Sci        ISSN: 0961-8368            Impact factor:   6.725


  21 in total

Review 1.  Ligand-binding proteins: their potential for application in systems for controlled delivery and uptake of ligands.

Authors:  F A de Wolf; G M Brett
Journal:  Pharmacol Rev       Date:  2000-06       Impact factor: 25.468

2.  Construction of a fluorescent biosensor family.

Authors:  Robert M de Lorimier; J Jeff Smith; Mary A Dwyer; Loren L Looger; Kevin M Sali; Chad D Paavola; Shahir S Rizk; Shamil Sadigov; David W Conrad; Leslie Loew; Homme W Hellinga
Journal:  Protein Sci       Date:  2002-11       Impact factor: 6.725

3.  Steady-state tyrosine fluorescence to study the lipid-binding properties of a wheat non-specific lipid-transfer protein (nsLTP1).

Authors:  J P Douliez; T Michon; D Marion
Journal:  Biochim Biophys Acta       Date:  2000-07-31

4.  Exact rotamer optimization for protein design.

Authors:  D Benjamin Gordon; Geoffrey K Hom; Stephen L Mayo; Niles A Pierce
Journal:  J Comput Chem       Date:  2003-01-30       Impact factor: 3.376

Review 5.  Periplasmic binding proteins: a versatile superfamily for protein engineering.

Authors:  Mary A Dwyer; Homme W Hellinga
Journal:  Curr Opin Struct Biol       Date:  2004-08       Impact factor: 6.809

6.  Binding mechanism of nonspecific lipid transfer proteins and their role in plant defense.

Authors:  Chao-Sheng Cheng; Dharmaraj Samuel; Yaw-Jen Liu; Je-Chyi Shyu; Szu-Ming Lai; Ku-Feng Lin; Ping-Chiang Lyu
Journal:  Biochemistry       Date:  2004-11-02       Impact factor: 3.162

7.  Solution structure of plant nonspecific lipid transfer protein-2 from rice (Oryza sativa).

Authors:  Dharmaraj Samuel; Yaw-Jen Liu; Chao-Sheng Cheng; Ping-Chiang Lyu
Journal:  J Biol Chem       Date:  2002-05-13       Impact factor: 5.157

8.  Potential application of plant lipid transfer proteins for drug delivery.

Authors:  C Pato; M Le Borgne; G Le Baut; P Le Pape; D Marion; J P Douliez
Journal:  Biochem Pharmacol       Date:  2001-09-01       Impact factor: 5.858

9.  A fluorescently labeled intestinal fatty acid binding protein. Interactions with fatty acids and its use in monitoring free fatty acids.

Authors:  G V Richieri; R T Ogata; A M Kleinfeld
Journal:  J Biol Chem       Date:  1992-11-25       Impact factor: 5.157

10.  Synthesis, spectral properties, and use of 6-acryloyl-2-dimethylaminonaphthalene (Acrylodan). A thiol-selective, polarity-sensitive fluorescent probe.

Authors:  F G Prendergast; M Meyer; G L Carlson; S Iida; J D Potter
Journal:  J Biol Chem       Date:  1983-06-25       Impact factor: 5.157

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  4 in total

1.  OptGraft: A computational procedure for transferring a binding site onto an existing protein scaffold.

Authors:  Hossein Fazelinia; Patrick C Cirino; Costas D Maranas
Journal:  Protein Sci       Date:  2009-01       Impact factor: 6.725

2.  Computational protein design: Advances in the design and redesign of biomolecular nanostructures.

Authors:  Jeffery G Saven
Journal:  Curr Opin Colloid Interface Sci       Date:  2010-04-01       Impact factor: 6.448

Review 3.  Environmentally sensitive fluorescent sensors based on synthetic peptides.

Authors:  Laurence Choulier; Karin Enander
Journal:  Sensors (Basel)       Date:  2010-03-31       Impact factor: 3.576

4.  Trastuzumab-Peptide interactions: mechanism and application in structure-based ligand design.

Authors:  Tian-Yang Sun; Qi Wang; Jin Zhang; Tao Wu; Fan Zhang
Journal:  Int J Mol Sci       Date:  2013-08-15       Impact factor: 5.923

  4 in total

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