Literature DB >> 17382321

RNA recognition mechanism of eukaryote tRNA (m7G46) methyltransferase (Trm8-Trm82 complex).

Keisuke Matsumoto1, Takashi Toyooka, Chie Tomikawa, Anna Ochi, Yoshitaka Takano, Naoyuki Takayanagi, Yaeta Endo, Hiroyuki Hori.   

Abstract

Yeast tRNA (m(7)G46) methyltransferase contains two protein subunits (Trm8 and Trm82). To address the RNA recognition mechanism of the Trm8-Trm82 complex, we investigated methyl acceptance activities of eight truncated yeast tRNA(Phe) transcripts. Both the D-stem and T-stem structures were required for efficient methyl-transfer. To clarify the role of the D-stem structure, we tested four mutant transcripts, in which tertiary base pairs were disrupted. The tertiary base pairs were important but not essential for the methyl-transfer to yeast tRNA(Phe) transcript, suggesting that these base pairs support the induced fit of the G46 base into the catalytic pocket.

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Year:  2007        PMID: 17382321     DOI: 10.1016/j.febslet.2007.03.023

Source DB:  PubMed          Journal:  FEBS Lett        ISSN: 0014-5793            Impact factor:   4.124


  13 in total

Review 1.  Diversity in mechanism and function of tRNA methyltransferases.

Authors:  William E Swinehart; Jane E Jackman
Journal:  RNA Biol       Date:  2015       Impact factor: 4.652

2.  Substrate tRNA recognition mechanism of eubacterial tRNA (m1A58) methyltransferase (TrmI).

Authors:  Hiroyuki Takuma; Natsumi Ushio; Masayuki Minoji; Ai Kazayama; Naoki Shigi; Akira Hirata; Chie Tomikawa; Anna Ochi; Hiroyuki Hori
Journal:  J Biol Chem       Date:  2015-01-15       Impact factor: 5.157

Review 3.  Novel roles of METTL1/WDR4 in tumor via m7G methylation.

Authors:  Wenli Cheng; Aili Gao; Hui Lin; Wenjuan Zhang
Journal:  Mol Ther Oncolytics       Date:  2022-06-07       Impact factor: 6.311

4.  Structural model of the M7G46 Methyltransferase TrmB in complex with tRNA.

Authors:  Katharina F Blersch; Jan-Philipp Burchert; Sophie-Charlotte August; Luisa Welp; Piotr Neumann; Sarah Köster; Henning Urlaub; Ralf Ficner
Journal:  RNA Biol       Date:  2021-05-19       Impact factor: 4.652

5.  Development of a cell-free protein synthesis system for practical use.

Authors:  Yaeta Endo
Journal:  Proc Jpn Acad Ser B Phys Biol Sci       Date:  2021       Impact factor: 3.493

Review 6.  Methylated nucleosides in tRNA and tRNA methyltransferases.

Authors:  Hiroyuki Hori
Journal:  Front Genet       Date:  2014-05-23       Impact factor: 4.599

Review 7.  Two-subunit enzymes involved in eukaryotic post-transcriptional tRNA modification.

Authors:  Michael P Guy; Eric M Phizicky
Journal:  RNA Biol       Date:  2014       Impact factor: 4.652

8.  Binding synergy as an essential step for tRNA editing and modification enzyme codependence in Trypanosoma brucei.

Authors:  Katherine M McKenney; Mary Anne T Rubio; Juan D Alfonzo
Journal:  RNA       Date:  2017-10-17       Impact factor: 4.942

Review 9.  Multi-Substrate Specificity and the Evolutionary Basis for Interdependence in tRNA Editing and Methylation Enzymes.

Authors:  Sameer Dixit; Jeremy C Henderson; Juan D Alfonzo
Journal:  Front Genet       Date:  2019-02-14       Impact factor: 4.599

10.  N7-Methylguanine at position 46 (m7G46) in tRNA from Thermus thermophilus is required for cell viability at high temperatures through a tRNA modification network.

Authors:  Chie Tomikawa; Takashi Yokogawa; Tamotsu Kanai; Hiroyuki Hori
Journal:  Nucleic Acids Res       Date:  2009-11-24       Impact factor: 16.971

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