Literature DB >> 17381339

The expanding universe of noncoding RNAs.

G J Hannon1, F V Rivas, E P Murchison, J A Steitz.   

Abstract

The 71st Cold Spring Harbor Symposium on Quantitative Biology celebrated the numerous and expanding roles of regulatory RNAs in systems ranging from bacteria to mammals. It was clearly evident that noncoding RNAs are undergoing a renaissance, with reports of their involvement in nearly every cellular process. Previously known classes of longer noncoding RNAs were shown to function by every possible means-acting catalytically, sensing physiological states through adoption of complex secondary and tertiary structures, or using their primary sequences for recognition of target sites. The many recently discovered classes of small noncoding RNAs, generally less than 35 nucleotides in length, most often exert their effects by guiding regulatory complexes to targets via base-pairing. With the ability to analyze the RNA products of the genome in ever greater depth, it has become clear that the universe of noncoding RNAs may extend far beyond the boundaries we had previously imagined. Thus, as much as the Symposium highlighted exciting progress in the field, it also revealed how much farther we must go to understand fully the biological impact of noncoding RNAs.

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Year:  2006        PMID: 17381339     DOI: 10.1101/sqb.2006.71.064

Source DB:  PubMed          Journal:  Cold Spring Harb Symp Quant Biol        ISSN: 0091-7451


  39 in total

1.  The zipcode-binding protein ZBP1 influences the subcellular location of the Ro 60-kDa autoantigen and the noncoding Y3 RNA.

Authors:  Soyeong Sim; Jie Yao; David E Weinberg; Sherry Niessen; John R Yates; Sandra L Wolin
Journal:  RNA       Date:  2011-11-23       Impact factor: 4.942

2.  Identification of cis- and trans-acting factors involved in the localization of MALAT-1 noncoding RNA to nuclear speckles.

Authors:  Ryu Miyagawa; Keiko Tano; Rie Mizuno; Yo Nakamura; Kenichi Ijiri; Randeep Rakwal; Junko Shibato; Yoshinori Masuo; Akila Mayeda; Tetsuro Hirose; Nobuyoshi Akimitsu
Journal:  RNA       Date:  2012-02-21       Impact factor: 4.942

Review 3.  Structural features of metabolite-sensing riboswitches.

Authors:  Catherine A Wakeman; Wade C Winkler; Charles E Dann
Journal:  Trends Biochem Sci       Date:  2007-08-30       Impact factor: 13.807

Review 4.  Unveiling substrate RNA binding to H/ACA RNPs: one side fits all.

Authors:  Hong Li
Journal:  Curr Opin Struct Biol       Date:  2008-02       Impact factor: 6.809

5.  Genome-wide evolutionary analysis of the noncoding RNA genes and noncoding DNA of Paramecium tetraurelia.

Authors:  Chun-Long Chen; Hui Zhou; Jian-You Liao; Liang-Hu Qu; Laurence Amar
Journal:  RNA       Date:  2009-02-13       Impact factor: 4.942

6.  The subcellular distribution of an RNA quality control protein, the Ro autoantigen, is regulated by noncoding Y RNA binding.

Authors:  Soyeong Sim; David E Weinberg; Gabriele Fuchs; Keum Choi; Jina Chung; Sandra L Wolin
Journal:  Mol Biol Cell       Date:  2008-12-30       Impact factor: 4.138

7.  Epstein-Barr virus-induced miR-155 attenuates NF-kappaB signaling and stabilizes latent virus persistence.

Authors:  Fang Lu; Andreas Weidmer; Chang-Gong Liu; Stefano Volinia; Carlo M Croce; Paul M Lieberman
Journal:  J Virol       Date:  2008-08-27       Impact factor: 5.103

8.  miRNAs are essential for survival and differentiation of newborn neurons but not for expansion of neural progenitors during early neurogenesis in the mouse embryonic neocortex.

Authors:  Davide De Pietri Tonelli; Jeremy N Pulvers; Christiane Haffner; Elizabeth P Murchison; Gregory J Hannon; Wieland B Huttner
Journal:  Development       Date:  2008-12       Impact factor: 6.868

9.  Non-coding RNA detection methods combined to improve usability, reproducibility and precision.

Authors:  Peter Raasch; Ulf Schmitz; Nadja Patenge; Julio Vera; Bernd Kreikemeyer; Olaf Wolkenhauer
Journal:  BMC Bioinformatics       Date:  2010-09-29       Impact factor: 3.169

10.  Histone acetylations mark origins of polycistronic transcription in Leishmania major.

Authors:  Sean Thomas; Amanda Green; Nancy R Sturm; David A Campbell; Peter J Myler
Journal:  BMC Genomics       Date:  2009-04-08       Impact factor: 3.969

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