Literature DB >> 17381293

The function of RNAi in plant development.

R S Poethig1, A Peragine, M Yoshikawa, C Hunter, M Willmann, G Wu.   

Abstract

The morphological phenotype of mutations in genes required for posttranscriptional gene silencing (PTGS) or RNA interference (RNAi) in Arabidopsis demonstrates that this process is critical for normal development. One way in which RNAi contributes to gene regulation is through its involvement in the biogenesis of trans-acting small interfering RNAs (siRNAs). These endogenous siRNAs are derived from noncoding transcripts that are cleaved by a microRNA (miRNA) and mediate the silencing of protein-coding transcripts. Some protein-coding genes are also subject to miRNA-initiated transitive silencing. Several developmentally important transcription factors regulated by these silencing mechanisms have been identified.

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Year:  2006        PMID: 17381293     DOI: 10.1101/sqb.2006.71.030

Source DB:  PubMed          Journal:  Cold Spring Harb Symp Quant Biol        ISSN: 0091-7451


  21 in total

Review 1.  siRNA and miRNA processing: new functions for Cajal bodies.

Authors:  Olga Pontes; Craig S Pikaard
Journal:  Curr Opin Genet Dev       Date:  2008-03-11       Impact factor: 5.578

Review 2.  Epigenetic regulation in plants.

Authors:  Craig S Pikaard; Ortrun Mittelsten Scheid
Journal:  Cold Spring Harb Perspect Biol       Date:  2014-12-01       Impact factor: 10.005

Review 3.  Phased, secondary, small interfering RNAs in posttranscriptional regulatory networks.

Authors:  Qili Fei; Rui Xia; Blake C Meyers
Journal:  Plant Cell       Date:  2013-07-23       Impact factor: 11.277

4.  RNAi-mediated viral immunity requires amplification of virus-derived siRNAs in Arabidopsis thaliana.

Authors:  Xian-Bing Wang; Qingfa Wu; Takao Ito; Fabrizio Cillo; Wan-Xiang Li; Xuemei Chen; Jia-Lin Yu; Shou-Wei Ding
Journal:  Proc Natl Acad Sci U S A       Date:  2009-12-04       Impact factor: 11.205

5.  The microRNA-30 family is required for vertebrate hepatobiliary development.

Authors:  Nicholas J Hand; Zankhana R Master; Steven F Eauclaire; Daniel E Weinblatt; Randolph P Matthews; Joshua R Friedman
Journal:  Gastroenterology       Date:  2008-12-09       Impact factor: 22.682

6.  Genome-wide analysis of mRNA decay rates and their determinants in Arabidopsis thaliana.

Authors:  Reena Narsai; Katharine A Howell; A Harvey Millar; Nicholas O'Toole; Ian Small; James Whelan
Journal:  Plant Cell       Date:  2007-11-16       Impact factor: 11.277

7.  Mouse ES cells express endogenous shRNAs, siRNAs, and other Microprocessor-independent, Dicer-dependent small RNAs.

Authors:  Joshua E Babiarz; J Graham Ruby; Yangming Wang; David P Bartel; Robert Blelloch
Journal:  Genes Dev       Date:  2008-10-15       Impact factor: 11.361

8.  Identification of miniature inverted-repeat transposable elements (MITEs) and biogenesis of their siRNAs in the Solanaceae: new functional implications for MITEs.

Authors:  Hanhui Kuang; Chellappan Padmanabhan; Feng Li; Ayako Kamei; Pudota B Bhaskar; Shu Ouyang; Jiming Jiang; C Robin Buell; Barbara Baker
Journal:  Genome Res       Date:  2008-11-26       Impact factor: 9.043

9.  Suppression of antiviral silencing by cucumber mosaic virus 2b protein in Arabidopsis is associated with drastically reduced accumulation of three classes of viral small interfering RNAs.

Authors:  Juan A Diaz-Pendon; Feng Li; Wan-Xiang Li; Shou-Wei Ding
Journal:  Plant Cell       Date:  2007-06-22       Impact factor: 11.277

Review 10.  RNA Quality Control as a Key to Suppressing RNA Silencing of Endogenous Genes in Plants.

Authors:  Lin Liu; Xuemei Chen
Journal:  Mol Plant       Date:  2016-03-30       Impact factor: 13.164

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