Literature DB >> 17376739

Direct detection of human herpesvirus 6 DNA in serum by the loop-mediated isothermal amplification method.

Masaru Ihira1, Shiho Akimoto, Fumi Miyake, Ayano Fujita, Ken Sugata, Sadao Suga, Masahiro Ohashi, Naoko Nishimura, Takao Ozaki, Yoshizo Asano, Tetsushi Yoshikawa.   

Abstract

BACKGROUND: A more rapid and easier method is needed for monitoring human herpesvirus 6 (HHV-6) infections. The loop-mediated isothermal amplification method (LAMP) can detect viral DNA with high specificity, efficiency, and speed under isothermal conditions. LAMP requires only simple equipment that is available in hospital laboratories.
OBJECTIVES: We evaluated LAMP as a means of detecting HHV-6 DNA directly from patients' sera.
RESULTS: The sensitivity of the HHV-6 LAMP protocol without heat denaturation was 1000 copies/tube; with heat denaturation 10 copies/tube were detected. Three hundred serum samples from children with fever were analyzed. Using HHV-6 isolation as a definition of HHV-6 infection, the sensitivity, specificity, positive predictive value, and negative predictive value of the HHV-6 LAMP method without DNA extraction were 95.5%, 95.2%, 94.0%, and 96.4%, respectively.
CONCLUSION: Direct detection of HHV-6 DNA in serum with a modified HHV-6 LAMP could be used for rapid diagnosis of exanthem subitum (ES).

Entities:  

Mesh:

Substances:

Year:  2007        PMID: 17376739     DOI: 10.1016/j.jcv.2007.02.001

Source DB:  PubMed          Journal:  J Clin Virol        ISSN: 1386-6532            Impact factor:   3.168


  13 in total

1.  A loop-mediated isothermal amplification (LAMP) assay for Strongyloides stercoralis in stool that uses a visual detection method with SYTO-82 fluorescent dye.

Authors:  Matthew R Watts; Gregory James; Yasmin Sultana; Andrew N Ginn; Alexander C Outhred; Fanrong Kong; Jaco J Verweij; Jonathan R Iredell; Sharon C-A Chen; Rogan Lee
Journal:  Am J Trop Med Hyg       Date:  2013-12-09       Impact factor: 2.345

2.  Instrument-free nucleic acid amplification assays for global health settings.

Authors:  Paul LaBarre; David Boyle; Kenneth Hawkins; Bernhard Weigl
Journal:  Proc SPIE Int Soc Opt Eng       Date:  2011-05-16

3.  Discriminating between varicella-zoster virus vaccine and wild-type strains by loop-mediated isothermal amplification.

Authors:  Yuki Higashimoto; Masaru Ihira; Akane Ohta; Shigeki Inoue; Chie Usui; Yoshizo Asano; Tetsushi Yoshikawa
Journal:  J Clin Microbiol       Date:  2008-06-11       Impact factor: 5.948

4.  Evaluation of a direct reverse transcription loop-mediated isothermal amplification method without RNA extraction for the detection of human enterovirus 71 subgenotype C4 in nasopharyngeal swab specimens.

Authors:  Kai Nie; Shun-Xiang Qi; Yong Zhang; Le Luo; Yun Xie; Meng-Jie Yang; Yi Zhang; Jin Li; Hongwei Shen; Qi Li; Xue-Jun Ma
Journal:  PLoS One       Date:  2012-12-18       Impact factor: 3.240

5.  A simple, inexpensive device for nucleic acid amplification without electricity-toward instrument-free molecular diagnostics in low-resource settings.

Authors:  Paul LaBarre; Kenneth R Hawkins; Jay Gerlach; Jared Wilmoth; Andrew Beddoe; Jered Singleton; David Boyle; Bernhard Weigl
Journal:  PLoS One       Date:  2011-05-09       Impact factor: 3.240

6.  Development of Recombinase Polymerase Amplification Assays for Detection of Orientia tsutsugamushi or Rickettsia typhi.

Authors:  Chien-Chung Chao; Tatyana Belinskaya; Zhiwen Zhang; Wei-Mei Ching
Journal:  PLoS Negl Trop Dis       Date:  2015-07-10

7.  A loop-mediated isothermal amplification assay for the detection and quantification of JC polyomavirus in cerebrospinal fluid: a diagnostic and clinical management tool and technique for progressive multifocal leukoencephalopathy.

Authors:  Hitomi Kinoshita; Kazuo Nakamichi; Chang-Kweng Lim; Mutsuyo Takayama-Ito; Lixin Wang; Itoe Iizuka; Ichiro Kurane; Masayuki Saijo
Journal:  Virol J       Date:  2018-08-31       Impact factor: 4.099

Review 8.  Alternative molecular tests for virological diagnosis.

Authors:  Francesca Sidoti; Massimiliano Bergallo; Cristina Costa; Rossana Cavallo
Journal:  Mol Biotechnol       Date:  2013-03       Impact factor: 2.695

Review 9.  Loop mediated isothermal amplification (LAMP): a new generation of innovative gene amplification technique; perspectives in clinical diagnosis of infectious diseases.

Authors:  Manmohan Parida; Santhosh Sannarangaiah; Paban Kumar Dash; P V L Rao; Kouichi Morita
Journal:  Rev Med Virol       Date:  2008 Nov-Dec       Impact factor: 6.989

Review 10.  Advances in Directly Amplifying Nucleic Acids from Complex Samples.

Authors:  Faye M Walker; Kuangwen Hsieh
Journal:  Biosensors (Basel)       Date:  2019-09-30
View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.