Literature DB >> 17373794

Direct revelation of multiple conformations in RNA by femtosecond dynamics.

Liang Zhao1, Tianbing Xia.   

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Year:  2007        PMID： 17373794     DOI： 10.1021/ja068391q

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN： 0002-7863            Impact factor:   15.419


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  19 in total

1.  Extensive backbone dynamics in the GCAA RNA tetraloop analyzed using 13C NMR spin relaxation and specific isotope labeling.

Authors:  James E Johnson; Charles G Hoogstraten
Journal:  J Am Chem Soc       Date:  2008-12-10       Impact factor: 15.419

2.  RNA dynamics: it is about time.

Authors:  Hashim M Al-Hashimi; Nils G Walter
Journal:  Curr Opin Struct Biol       Date:  2008-06-09       Impact factor: 6.809

Review 3.  High-resolution reversible folding of hyperstable RNA tetraloops using molecular dynamics simulations.

Authors:  Alan A Chen; Angel E García
Journal:  Proc Natl Acad Sci U S A       Date:  2013-09-16       Impact factor: 11.205

4.  Computer Folding of RNA Tetraloops: Identification of Key Force Field Deficiencies.

Authors:  Petra Kührová; Robert B Best; Sandro Bottaro; Giovanni Bussi; Jiří Šponer; Michal Otyepka; Pavel Banáš
Journal:  J Chem Theory Comput       Date:  2016-08-04       Impact factor: 6.006

5.  Free-energy landscape of a hyperstable RNA tetraloop.

Authors:  Jacob C Miner; Alan A Chen; Angel E García
Journal:  Proc Natl Acad Sci U S A       Date:  2016-05-27       Impact factor: 11.205

Review 6.  Hierarchy of RNA functional dynamics.

Authors:  Anthony M Mustoe; Charles L Brooks; Hashim M Al-Hashimi
Journal:  Annu Rev Biochem       Date:  2014-03-05       Impact factor: 23.643

7.  Mapping the Universe of RNA Tetraloop Folds.

Authors:  Sandro Bottaro; Kresten Lindorff-Larsen
Journal:  Biophys J       Date:  2017-06-30       Impact factor: 4.033

8.  Ultrafast dynamics show that the theophylline and 3-methylxanthine aptamers employ a conformational capture mechanism for binding their ligands.

Authors:  Sang Won Lee; Liang Zhao; Arthur Pardi; Tianbing Xia
Journal:  Biochemistry       Date:  2010-04-06       Impact factor: 3.162

Review 9.  RNA Structural Dynamics As Captured by Molecular Simulations: A Comprehensive Overview.

Authors:  Jiří Šponer; Giovanni Bussi; Miroslav Krepl; Pavel Banáš; Sandro Bottaro; Richard A Cunha; Alejandro Gil-Ley; Giovanni Pinamonti; Simón Poblete; Petr Jurečka; Nils G Walter; Michal Otyepka
Journal:  Chem Rev       Date:  2018-01-03       Impact factor: 60.622

10.  Structural insight into RNA hairpin folding intermediates.

Authors:  Gregory R Bowman; Xuhui Huang; Yuan Yao; Jian Sun; Gunnar Carlsson; Leonidas J Guibas; Vijay S Pande
Journal:  J Am Chem Soc       Date:  2008-07-01       Impact factor: 15.419
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