Literature DB >> 17372994

Rapid and simple solid-phase esterification of sialic acid residues for quantitative glycomics by mass spectrometry.

Yoshiaki Miura1, Yasuro Shinohara, Jun-ichi Furukawa, Noriko Nagahori, Shin-Ichiro Nishimura.   

Abstract

A rapid and quantitative method for solid-phase methyl esterification of carboxy groups of various sialylated oligosaccharides has been established. The method employed a triazene derivative, 3-methyl-1-p-tolyltriazene, for facile derivatization of oligosaccharides immobilized onto general solid supports such as Affi-Gel Hz and gold colloidal nanoparticles in a multiwell plate. The workflow protocol was optimized for the solid-phase processing of captured sialylated/unsialylated oligosaccharides separated from crude sample mixtures by chemical ligation. From tryptic and/or PNGase F-digest mixtures of glycoproteins, purification by chemoselective immobilization, esterification and recovery were achieved in the same well of the filter plate within three hours when used in conjunction with "glycoblotting technology" (S.-I. Nishimura, K. Niikura, M. Kurogochi, T. Matsushita, M. Fumoto, H. Hinou, R. Kamitani, H. Nakagawa, K. Deguchi, N. Miura, K. Monde, H. Kondo, High-throughput protein glycomics: Combined use of chemoselective glycoblotting and MALDI-TOF/TOF mass spectrometry: Angew. Chem. 2005, 117, 93-98; Angew. Chem. Int. Ed. 2005, 44, 91-96). The recovered materials were directly applicable to subsequent characterization by mass spectrometric techniques such as MALDI-TOF for large-scale glycomics of both neutral and sialylated oligosaccharides. On-bead/on-gold nanoparticle derivatization of glycans containing sialic acids allowed rapid and quantitative glycoform profiling by MALDI-TOF MS with reflector and positive ion mode. In addition to its simplicity and speed, the method eliminates the use of unfavorable halogenated solvents such as chloroform and dichloromethane or volatile solvents such as diethyl ether and hexane, resulting in a practical and green chemical method for automated robotic adaptation.

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Year:  2007        PMID: 17372994     DOI: 10.1002/chem.200601872

Source DB:  PubMed          Journal:  Chemistry        ISSN: 0947-6539            Impact factor:   5.236


  29 in total

1.  Reliable LC-MS quantitative glycomics using iGlycoMab stable isotope labeled glycans as internal standards.

Authors:  Shiyue Zhou; Nadia Tello; Alex Harvey; Barry Boyes; Ron Orlando; Yehia Mechref
Journal:  Electrophoresis       Date:  2016-04-09       Impact factor: 3.535

2.  Matrix-Assisted Laser Desorption/Ionization Mass Spectrometry: Mechanistic Studies and Methods for Improving the Structural Identification of Carbohydrates.

Authors:  Yin-Hung Lai; Yi-Sheng Wang
Journal:  Mass Spectrom (Tokyo)       Date:  2017-09-22

3.  Insights into glycan biosynthesis in chemically-induced hepatocellular carcinoma in rats: A glycomic analysis.

Authors:  Amr Amin; Asma Bashir; Nazar Zaki; Diane McCarthy; Sanjida Ahmed; Mohamed Lotfy
Journal:  World J Gastroenterol       Date:  2015-05-28       Impact factor: 5.742

4.  Sialylation determines the nephritogenicity of IgG3 cryoglobulins.

Authors:  Masako Otani; Aki Kuroki; Shuichi Kikuchi; Masao Kihara; Junichiro Nakata; Kiyoaki Ito; Jun-ichi Furukawa; Yasuro Shinohara; Shozo Izui
Journal:  J Am Soc Nephrol       Date:  2012-09-27       Impact factor: 10.121

5.  Identification of unique glycoisoforms of vitamin D-binding protein and haptoglobin as biomarker candidates in hepatocarcinogenesis of STAM mice.

Authors:  Yasunobu Yoshida; Jun-Ichi Furukawa; Shoichi Naito; Kenichi Higashino; Yoshito Numata; Yasuro Shinohara
Journal:  Glycoconj J       Date:  2018-09-08       Impact factor: 2.916

Review 6.  Chemoenzymatic method for glycomics: Isolation, identification, and quantitation.

Authors:  Shuang Yang; Abigail Rubin; Shadi Toghi Eshghi; Hui Zhang
Journal:  Proteomics       Date:  2015-11-06       Impact factor: 3.984

Review 7.  Analysis of carbohydrates and glycoconjugates by matrix-assisted laser desorption/ionization mass spectrometry: an update for 2009-2010.

Authors:  David J Harvey
Journal:  Mass Spectrom Rev       Date:  2014-05-26       Impact factor: 10.946

8.  Microfluidic Capillary Electrophoresis-Mass Spectrometry for Analysis of Monosaccharides, Oligosaccharides, and Glycopeptides.

Authors:  Kshitij Khatri; Joshua A Klein; John R Haserick; Deborah R Leon; Catherine E Costello; Mark E McComb; Joseph Zaia
Journal:  Anal Chem       Date:  2017-06-06       Impact factor: 6.986

Review 9.  Solid-phase glycan isolation for glycomics analysis.

Authors:  Shuang Yang; Hui Zhang
Journal:  Proteomics Clin Appl       Date:  2012-12       Impact factor: 3.494

10.  Total cellular glycomics allows characterizing cells and streamlining the discovery process for cellular biomarkers.

Authors:  Naoki Fujitani; Jun-ichi Furukawa; Kayo Araki; Tsuyoshi Fujioka; Yasuhiro Takegawa; Jinhua Piao; Taiki Nishioka; Tomohiro Tamura; Toshio Nikaido; Makoto Ito; Yukio Nakamura; Yasuro Shinohara
Journal:  Proc Natl Acad Sci U S A       Date:  2013-01-23       Impact factor: 11.205

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