Literature DB >> 17367333

Quantification of T-cell dynamics: from telomeres to DNA labeling.

José A M Borghans1, Rob J de Boer.   

Abstract

Immunology has traditionally been a qualitative science describing the cellular and molecular components of the immune system and their functions. Only quite recently have new experimental techniques paved the way for a more quantitative approach of immunology. Lymphocyte telomere lengths have been measured to get insights into the proliferation rate of different lymphocyte subsets, T-cell receptor excision circles have been used to quantify the daily output of new T cells from the thymus, and bromodeoxyuridine and stable isotope labeling have been applied to measure proliferation and death rates of naive and memory lymphocytes. A common problem of the above techniques is the translation of the resulting data into relevant parameters, such as the typical division and death rate of the different lymphocyte populations. Theoretical immunology has contributed significantly to the interpretation of such quantitative experimental data, thereby resolving diverse controversies and, most importantly, has suggested novel experiments, allowing for more conclusive and quantitative interpretations. In this article, we review a variety of different models that have been used to interpret data on lymphocyte kinetics in healthy human subjects and discuss their contributions and limitations.

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Year:  2007        PMID: 17367333     DOI: 10.1111/j.1600-065X.2007.00497.x

Source DB:  PubMed          Journal:  Immunol Rev        ISSN: 0105-2896            Impact factor:   12.988


  29 in total

1.  Modelling deuterium labelling of lymphocytes with temporal and/or kinetic heterogeneity.

Authors:  Rob J De Boer; Alan S Perelson; Ruy M Ribeiro
Journal:  J R Soc Interface       Date:  2012-04-18       Impact factor: 4.118

2.  Analysis of immune cells draining from the abdominal cavity as a novel tool to study intestinal transplant immunobiology.

Authors:  D Meier; H Cagnola; D Ramisch; C Rumbo; F Chirdo; G Docena; G E Gondolesi; M Rumbo
Journal:  Clin Exp Immunol       Date:  2010-10       Impact factor: 4.330

Review 3.  Understanding diseases by mouse click: the promise and potential of computational approaches in Systems Biology.

Authors:  F Klauschen; B R Angermann; M Meier-Schellersheim
Journal:  Clin Exp Immunol       Date:  2007-07-30       Impact factor: 4.330

4.  A single-cell pedigree analysis of alternative stochastic lymphocyte fates.

Authors:  E D Hawkins; J F Markham; L P McGuinness; P D Hodgkin
Journal:  Proc Natl Acad Sci U S A       Date:  2009-07-24       Impact factor: 11.205

5.  Explicit kinetic heterogeneity: mathematical models for interpretation of deuterium labeling of heterogeneous cell populations.

Authors:  Vitaly V Ganusov; José A M Borghans; Rob J De Boer
Journal:  PLoS Comput Biol       Date:  2010-02-05       Impact factor: 4.475

6.  Quantifying T lymphocyte turnover.

Authors:  Rob J De Boer; Alan S Perelson
Journal:  J Theor Biol       Date:  2013-01-09       Impact factor: 2.691

7.  Measurement of proliferation and disappearance of rapid turnover cell populations in human studies using deuterium-labeled glucose.

Authors:  Derek C Macallan; Becca Asquith; Yan Zhang; Catherine de Lara; Hala Ghattas; Julien Defoiche; Peter C L Beverley
Journal:  Nat Protoc       Date:  2009-08-20       Impact factor: 13.491

8.  Sparse production but preferential incorporation of recently produced naive T cells in the human peripheral pool.

Authors:  Nienke Vrisekoop; Ineke den Braber; Anne Bregje de Boer; An F C Ruiter; Mariëtte T Ackermans; Saskia N van der Crabben; Elise H R Schrijver; Gerrit Spierenburg; Hans P Sauerwein; Mette D Hazenberg; Rob J de Boer; Frank Miedema; José A M Borghans; Kiki Tesselaar
Journal:  Proc Natl Acad Sci U S A       Date:  2008-04-17       Impact factor: 11.205

9.  Influx of recent thymic emigrants into autoimmune thyroid disease glands in humans.

Authors:  M P Armengol; L Sabater; M Fernández; M Ruíz; N Alonso; M J Otero; E Martínez-Cáceres; D Jaraquemada; R Pujol-Borrell
Journal:  Clin Exp Immunol       Date:  2008-07-11       Impact factor: 4.330

10.  In vivo dynamical interactions between CD4 Tregs, CD8 Tregs and CD4+ CD25- cells in mice.

Authors:  Arnon Arazi; Amir Sharabi; Heidy Zinger; Edna Mozes; Avidan U Neumann
Journal:  PLoS One       Date:  2009-12-24       Impact factor: 3.240

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