Literature DB >> 17367143

A fast-acting reagent for accurate analysis of RNA secondary and tertiary structure by SHAPE chemistry.

Stefanie A Mortimer1, Kevin M Weeks.   

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Year:  2007        PMID: 17367143     DOI: 10.1021/ja0704028

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


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  191 in total

Review 1.  Novel modifications in RNA.

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Journal:  ACS Chem Biol       Date:  2011-12-23       Impact factor: 5.100

2.  Nonhierarchical ribonucleoprotein assembly suggests a strain-propagation model for protein-facilitated RNA folding.

Authors:  Caia D S Duncan; Kevin M Weeks
Journal:  Biochemistry       Date:  2010-07-06       Impact factor: 3.162

3.  Femtomole SHAPE reveals regulatory structures in the authentic XMRV RNA genome.

Authors:  Jacob K Grohman; Sumith Kottegoda; Robert J Gorelick; Nancy L Allbritton; Kevin M Weeks
Journal:  J Am Chem Soc       Date:  2011-11-29       Impact factor: 15.419

4.  Domain III of the T. thermophilus 23S rRNA folds independently to a near-native state.

Authors:  Shreyas S Athavale; J Jared Gossett; Chiaolong Hsiao; Jessica C Bowman; Eric O'Neill; Eli Hershkovitz; Thanawadee Preeprem; Nicholas V Hud; Roger M Wartell; Stephen C Harvey; Loren Dean Williams
Journal:  RNA       Date:  2012-02-14       Impact factor: 4.942

Review 5.  Folding and finding RNA secondary structure.

Authors:  David H Mathews; Walter N Moss; Douglas H Turner
Journal:  Cold Spring Harb Perspect Biol       Date:  2010-08-04       Impact factor: 10.005

Review 6.  Advances in RNA structure analysis by chemical probing.

Authors:  Kevin M Weeks
Journal:  Curr Opin Struct Biol       Date:  2010-05-04       Impact factor: 6.809

7.  The RNA transport element of the murine musD retrotransposon requires long-range intramolecular interactions for function.

Authors:  Michal Legiewicz; Andrei S Zolotukhin; Guy R Pilkington; Katarzyna J Purzycka; Michelle Mitchell; Hiroaki Uranishi; Jenifer Bear; George N Pavlakis; Stuart F J Le Grice; Barbara K Felber
Journal:  J Biol Chem       Date:  2010-10-26       Impact factor: 5.157

8.  In-cell RNA structure probing with SHAPE-MaP.

Authors:  Matthew J Smola; Kevin M Weeks
Journal:  Nat Protoc       Date:  2018-05-03       Impact factor: 13.491

9.  The cellular environment stabilizes adenine riboswitch RNA structure.

Authors:  Jillian Tyrrell; Jennifer L McGinnis; Kevin M Weeks; Gary J Pielak
Journal:  Biochemistry       Date:  2013-11-20       Impact factor: 3.162

10.  Ribosome RNA assembly intermediates visualized in living cells.

Authors:  Jennifer L McGinnis; Kevin M Weeks
Journal:  Biochemistry       Date:  2014-05-12       Impact factor: 3.162

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