Literature DB >> 1736305

The third chromophore of DNA photolyase: Trp-277 of Escherichia coli DNA photolyase repairs thymine dimers by direct electron transfer.

S T Kim1, Y F Li, A Sancar.   

Abstract

Photolyases repair pyrimidine dimers in DNA by converting the light energy of 300- to 500-nm photons into chemical energy. Enzymes from various organisms contain two chromophore cofactors (FADH2 and either methenyltetrahydrofolate or 8-hydroxy-5-deazaflavin) that absorb the low-energy photons and initiate splitting of the cyclobutane ring by a radical mechanism. Here, we show that, in addition to these two chromophores, in the far UV range, direct excitation of one specific tryptophan residue (out of 15 total) in the polypeptide chain of Escherichia coli photolyase leads to splitting of the cyclobutane ring with high quantum yield (phi = 0.56), independent of the other chromophores. The specific tryptophan residue responsible for photosensitized repair was identified as Trp-277 by site-specific mutagenesis.

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Year:  1992        PMID: 1736305      PMCID: PMC48352          DOI: 10.1073/pnas.89.3.900

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  26 in total

1.  The effects of light on the human body.

Authors:  R J Wurtman
Journal:  Sci Am       Date:  1975-07       Impact factor: 2.142

2.  The active form of Escherichia coli DNA photolyase contains a fully reduced flavin and not a flavin radical, both in vivo and in vitro.

Authors:  G Payne; P F Heelis; B R Rohrs; A Sancar
Journal:  Biochemistry       Date:  1987-11-03       Impact factor: 3.162

Review 3.  DNA repair enzymes.

Authors:  A Sancar; G B Sancar
Journal:  Annu Rev Biochem       Date:  1988       Impact factor: 23.643

4.  Solvent dependence of pyrimidine dimer splitting in a covalently linked dimer-indole system.

Authors:  S T Kim; R F Hartman; S D Rose
Journal:  Photochem Photobiol       Date:  1990-10       Impact factor: 3.421

5.  Effect of base, pentose, and phosphodiester backbone structures on binding and repair of pyrimidine dimers by Escherichia coli DNA photolyase.

Authors:  S T Kim; A Sancar
Journal:  Biochemistry       Date:  1991-09-03       Impact factor: 3.162

6.  Absolute action spectrum of E-FADH2 and E-FADH2-MTHF forms of Escherichia coli DNA photolyase.

Authors:  G Payne; A Sancar
Journal:  Biochemistry       Date:  1990-08-21       Impact factor: 3.162

7.  Determination of rates and yields of interchromophore (folate----flavin) energy transfer and intermolecular (flavin----DNA) electron transfer in Escherichia coli photolyase by time-resolved fluorescence and absorption spectroscopy.

Authors:  S T Kim; P F Heelis; T Okamura; Y Hirata; N Mataga; A Sancar
Journal:  Biochemistry       Date:  1991-11-26       Impact factor: 3.162

8.  Mechanism of damage recognition by Escherichia coli DNA photolyase.

Authors:  I Husain; G B Sancar; S R Holbrook; A Sancar
Journal:  J Biol Chem       Date:  1987-09-25       Impact factor: 5.157

9.  Identification of the second chromophore of Escherichia coli and yeast DNA photolyases as 5,10-methenyltetrahydrofolate.

Authors:  J L Johnson; S Hamm-Alvarez; G Payne; G B Sancar; K V Rajagopalan; A Sancar
Journal:  Proc Natl Acad Sci U S A       Date:  1988-04       Impact factor: 11.205

10.  Photolyases from Saccharomyces cerevisiae and Escherichia coli recognize common binding determinants in DNA containing pyrimidine dimers.

Authors:  M Baer; G B Sancar
Journal:  Mol Cell Biol       Date:  1989-11       Impact factor: 4.272

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  15 in total

1.  Ultraviolet B radiation enhances a phytochrome-B-mediated photomorphogenic response in Arabidopsis.

Authors:  H E Boccalandro; C A Mazza; M A Mazzella; J J Casal; C L Ballaré
Journal:  Plant Physiol       Date:  2001-06       Impact factor: 8.340

2.  A deoxyribozyme that harnesses light to repair thymine dimers in DNA.

Authors:  Daniel J-F Chinnapen; Dipankar Sen
Journal:  Proc Natl Acad Sci U S A       Date:  2003-12-22       Impact factor: 11.205

3.  Efficient cycloreversion of cis,syn-thymine photodimer by a Zn2+ -1,4,7,10-tetraazacyclododecane complex bearing a lumiflavin and tryptophan by chemical reduction and photoreduction of a lumiflavin unit.

Authors:  Yasuyuki Yamada; Shin Aoki
Journal:  J Biol Inorg Chem       Date:  2006-08-30       Impact factor: 3.358

4.  Photoreactivation of DNA by an archaeal nucleoprotein Sso7d.

Authors:  Ryu Tashiro; Andrew H-J Wang; Hiroshi Sugiyama
Journal:  Proc Natl Acad Sci U S A       Date:  2006-10-30       Impact factor: 11.205

5.  Flavin adenine dinucleotide as a chromophore of the Xenopus (6-4)photolyase.

Authors:  T Todo; S T Kim; K Hitomi; E Otoshi; T Inui; H Morioka; H Kobayashi; E Ohtsuka; H Toh; M Ikenaga
Journal:  Nucleic Acids Res       Date:  1997-02-15       Impact factor: 16.971

Review 6.  Photolyase: Dynamics and electron-transfer mechanisms of DNA repair.

Authors:  Meng Zhang; Lijuan Wang; Dongping Zhong
Journal:  Arch Biochem Biophys       Date:  2017-08-09       Impact factor: 4.013

7.  Fourier-transform infrared study of the photoactivation process of Xenopus (6-4) photolyase.

Authors:  Daichi Yamada; Yu Zhang; Tatsuya Iwata; Kenichi Hitomi; Elizabeth D Getzoff; Hideki Kandori
Journal:  Biochemistry       Date:  2012-07-13       Impact factor: 3.162

8.  Enhancement of blue-light sensitivity of Arabidopsis seedlings by a blue light receptor cryptochrome 2.

Authors:  C Lin; H Yang; H Guo; T Mockler; J Chen; A R Cashmore
Journal:  Proc Natl Acad Sci U S A       Date:  1998-03-03       Impact factor: 11.205

Review 9.  Photobiology of bacteria.

Authors:  K J Hellingwerf; W Crielaard; W D Hoff; H C Matthijs; L R Mur; B J van Rotterdam
Journal:  Antonie Van Leeuwenhoek       Date:  1994       Impact factor: 2.271

10.  The Roles of Several Residues of Escherichia coli DNA Photolyase in the Highly Efficient Photo-Repair of Cyclobutane Pyrimidine Dimers.

Authors:  Lei Xu; Guoping Zhu
Journal:  J Nucleic Acids       Date:  2010-08-31
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