Literature DB >> 17361432

Purification and characterization of a highly thermostable alpha-L-Arabinofuranosidase from Geobacillus caldoxylolyticus TK4.

Sabriye Canakci1, Ali Osman Belduz, Badal C Saha, Ahmet Yasar, Faik Ahmet Ayaz, Nurettin Yayli.   

Abstract

The gene encoding an alpha-L: -arabinofuranosidase from Geobacillus caldoxylolyticus TK4, AbfATK4, was isolated, cloned, and sequenced. The deduced protein had a molecular mass of about 58 kDa, and analysis of its amino acid sequence revealed significant homology and conservation of different catalytic residues with alpha-L: -arabinofuranosidases belonging to family 51 of the glycoside hydrolases. A histidine tag was introduced at the N-terminal end of AbfATK4, and the recombinant protein was expressed in Escherichia coli BL21, under control of isopropyl-beta-D-thiogalactopyranoside-inducible T7 promoter. The enzyme was purified by nickel affinity chromatography. The molecular mass of the native protein, as determined by gel filtration, was about 236 kDa, suggesting a homotetrameric structure. AbfATK4 was active at a broad pH range (pH 5.0-10.0) and at a broad temperature range (40-85 degrees C), and it had an optimum pH of 6.0 and an optimum temperature of 75-80 degrees C. The enzyme was more thermostable than previously described arabinofuranosidases and did not lose any activity after 48 h incubation at 70 degrees C. The protein exhibited a high level of activity with p-nitrophenyl-alpha-L: -arabinofuranoside, with apparent K (m) and V (max) values of 0.17 mM and 588.2 U/mg, respectively. AbfATK4 also exhibited a low level of activity with p-nitrophenyl-beta-D: -xylopyranoside, with apparent K (m) and V (max) values of 1.57 mM and 151.5 U/mg, respectively. AbfATK4 released L: -arabinose only from arabinan and arabinooligosaccharides. No endoarabinanase activity was detected. These findings suggest that AbfATK4 is an exo-acting enzyme.

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Year:  2007        PMID: 17361432     DOI: 10.1007/s00253-007-0884-1

Source DB:  PubMed          Journal:  Appl Microbiol Biotechnol        ISSN: 0175-7598            Impact factor:   4.813


  7 in total

1.  Enzymatic Mechanism for Arabinan Degradation and Transport in the Thermophilic Bacterium Caldanaerobius polysaccharolyticus.

Authors:  Daniel Wefers; Jia Dong; Ahmed M Abdel-Hamid; Hans Müller Paul; Gabriel V Pereira; Yejun Han; Dylan Dodd; Ramiya Baskaran; Beth Mayer; Roderick I Mackie; Isaac Cann
Journal:  Appl Environ Microbiol       Date:  2017-08-31       Impact factor: 4.792

Review 2.  Thermophilic Degradation of Hemicellulose, a Critical Feedstock in the Production of Bioenergy and Other Value-Added Products.

Authors:  Isaac Cann; Gabriel V Pereira; Ahmed M Abdel-Hamid; Heejin Kim; Daniel Wefers; Boniface B Kayang; Tamotsu Kanai; Takaaki Sato; Rafael C Bernardi; Haruyuki Atomi; Roderick I Mackie
Journal:  Appl Environ Microbiol       Date:  2020-03-18       Impact factor: 4.792

Review 3.  Thermostable enzymes as biocatalysts in the biofuel industry.

Authors:  Carl J Yeoman; Yejun Han; Dylan Dodd; Charles M Schroeder; Roderick I Mackie; Isaac K O Cann
Journal:  Adv Appl Microbiol       Date:  2010-03-06       Impact factor: 5.086

4.  Cloning, expression and characterization of a glycoside hydrolase family 51 α-l-arabinofuranosidase from Thermoanaerobacterium thermosaccharolyticum DSM 571.

Authors:  Hao Shi; Feng Gao; Xing Yan; Qingfei Li; Xinling Nie
Journal:  3 Biotech       Date:  2022-07-16       Impact factor: 2.893

5.  A novel bifunctional GH51 exo-α-l-arabinofuranosidase/endo-xylanase from Alicyclobacillus sp. A4 with significant biomass-degrading capacity.

Authors:  Wenxia Yang; Yingguo Bai; Peilong Yang; Huiying Luo; Huoqing Huang; Kun Meng; Pengjun Shi; Yaru Wang; Bin Yao
Journal:  Biotechnol Biofuels       Date:  2015-11-30       Impact factor: 6.040

6.  Characterisation of three novel α-L-arabinofuranosidases from a compost metagenome.

Authors:  Brent Fortune; Sizwe Mhlongo; Leonardo Joaquim van Zyl; Robert Huddy; Mariette Smart; Marla Trindade
Journal:  BMC Biotechnol       Date:  2019-04-18       Impact factor: 2.563

7.  Biochemical and Molecular Dynamics Study of a Novel GH 43 α-l-Arabinofuranosidase/β-Xylosidase From Caldicellulosiruptor saccharolyticus DSM8903.

Authors:  Md Abu Saleh; Shafi Mahmud; Sarah Albogami; Ahmed M El-Shehawi; Gobindo Kumar Paul; Shirmin Islam; Amit Kumar Dutta; Md Salah Uddin; Shahriar Zaman
Journal:  Front Bioeng Biotechnol       Date:  2022-02-11
  7 in total

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