Literature DB >> 17356203

An efficient Earth Mover's Distance algorithm for robust histogram comparison.

Haibin Ling1, Kazunori Okada.   

Abstract

We propose EMD-L1: a fast and exact algorithm for computing the Earth Mover's Distance (EMD) between a pair of histograms. The efficiency of the new algorithm enables its application to problems that were previously prohibitive due to high time complexities. The proposed EMD-L1 significantly simplifies the original linear programming formulation of EMD. Exploiting the L1 metric structure, the number of unknown variables in EMD-L1 is reduced to O(N) from O(N2) of the original EMD for a histogram with N bins. In addition, the number of constraints is reduced by half and the objective function of the linear program is simplified. Formally, without any approximation, we prove that the EMD-L1 formulation is equivalent to the original EMD with a L1 ground distance. To perform the EMD-L1 computation, we propose an efficient tree-based algorithm, Tree-EMD. Tree-EMD exploits the fact that a basic feasible solution of the simplex algorithm-based solver forms a spanning tree when we interpret EMD-L1 as a network flow optimization problem. We empirically show that this new algorithm has an average time complexity of O(N2), which significantly improves the best reported supercubic complexity of the original EMD. The accuracy of the proposed methods is evaluated by experiments for two computation-intensive problems: shape recognition and interest point matching using multidimensional histogram-based local features. For shape recognition, EMD-L1 is applied to compare shape contexts on the widely tested MPEG7 shape data set, as well as an articulated shape data set. For interest point matching, SIFT, shape context and spin image are tested on both synthetic and real image pairs with large geometrical deformation, illumination change, and heavy intensity noise. The results demonstrate that our EMD-L1-based solutions outperform previously reported state-of-the-art features and distance measures in solving the two tasks.

Mesh:

Year:  2007        PMID: 17356203     DOI: 10.1109/TPAMI.2007.1058

Source DB:  PubMed          Journal:  IEEE Trans Pattern Anal Mach Intell        ISSN: 0098-5589            Impact factor:   6.226


  23 in total

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Journal:  AAPS J       Date:  2018-04-12       Impact factor: 4.009

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4.  Shape retrieval using hierarchical total Bregman soft clustering.

Authors:  Meizhu Liu; Baba C Vemuri; Shun-Ichi Amari; Frank Nielsen
Journal:  IEEE Trans Pattern Anal Mach Intell       Date:  2012-12       Impact factor: 6.226

5.  Regularized Wasserstein Means for Aligning Distributional Data.

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Journal:  Proc Conf AAAI Artif Intell       Date:  2020-04-03

6.  Alpha shapes applied to molecular shape characterization exhibit novel properties compared to established shape descriptors.

Authors:  J Anthony Wilson; Andreas Bender; Taner Kaya; Paul A Clemons
Journal:  J Chem Inf Model       Date:  2009-10       Impact factor: 4.956

7.  Multiscale Analysis of Neurite Orientation and Spatial Organization in Neuronal Images.

Authors:  Pankaj Singh; Pooran Negi; Fernanda Laezza; Manos Papadakis; Demetrio Labate
Journal:  Neuroinformatics       Date:  2016-10

8.  A linear optimal transportation framework for quantifying and visualizing variations in sets of images.

Authors:  Wei Wang; Dejan Slepčev; Saurav Basu; John A Ozolek; Gustavo K Rohde
Journal:  Int J Comput Vis       Date:  2013-01-01       Impact factor: 7.410

9.  Predicting pathologic tumor response to chemoradiotherapy with histogram distances characterizing longitudinal changes in 18F-FDG uptake patterns.

Authors:  Shan Tan; Hao Zhang; Yongxue Zhang; Wengen Chen; Warren D D'Souza; Wei Lu
Journal:  Med Phys       Date:  2013-10       Impact factor: 4.071

10.  On Markov Earth Mover's Distance.

Authors:  Jie Wei
Journal:  Int J Image Graph       Date:  2014-10
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