Literature DB >> 17355126

Molecular oxygen dependent steps in fatty acid oxidation by cyclooxygenase-1.

Arnab Mukherjee1, David W Brinkley, Keng-Ming Chang, Justine P Roth.   

Abstract

The mechanism by which cyclooxygenase-1 (COX-1), a heme- and tyrosyl radical-containing enzyme, catalyzes the regio- and stereospecific oxygenation of polyunsaturated fatty acids to prostaglandin or hydroperoxide products has not been understood. Steady-state kinetic studies conducted with the native substrate arachidonic acid and the slower substrate linoleic acid are described here. Second-order rate constants, kcat/KM for fatty acid and O2, are found to depend upon the concentration of the other cosubstrate. Competitive oxygen kinetic isotope effects (18O KIEs) kcat/KM(16,16O2)/kcat/KM(18,16O2) reveal that a peroxyl radical is formed in or before the first kinetically irreversible step. Together, the results indicate that the oxygenase reaction occurs by a sequential mechanism which most likely involves reversible abstraction of a hydrogen atom from the fatty acid prior to the trapping of the delocalized substrate radical by O2. The identity of the first kinetically irreversible step, subsequent to forming the peroxyl radical, is also discussed in the context of the magnitude of the oxygen kinetic isotope effects as well as the behavior of kcat/KM(O2) in response to changing solvent pH, pD, and viscosity.

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Year:  2007        PMID: 17355126     DOI: 10.1021/bi602502j

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  12 in total

Review 1.  Enzymes of the cyclooxygenase pathways of prostanoid biosynthesis.

Authors:  William L Smith; Yoshihiro Urade; Per-Johan Jakobsson
Journal:  Chem Rev       Date:  2011-09-27       Impact factor: 60.622

2.  Structural comparisons of arachidonic acid-induced radicals formed by prostaglandin H synthase-1 and -2.

Authors:  Ah-lim Tsai; Gang Wu; Corina E Rogge; Jian-Ming Lü; Sheng Peng; Wilfred A van der Donk; Graham Palmer; Gary J Gerfen; Richard J Kulmacz
Journal:  J Inorg Biochem       Date:  2010-11-27       Impact factor: 4.155

3.  Dissection of the stepwise mechanism to beta-lactam formation and elucidation of a rate-determining conformational change in beta-lactam synthetase.

Authors:  Mary L Raber; Michael F Freeman; Craig A Townsend
Journal:  J Biol Chem       Date:  2008-10-27       Impact factor: 5.157

Review 4.  Arteriolar oxygen reactivity: where is the sensor and what is the mechanism of action?

Authors:  William F Jackson
Journal:  J Physiol       Date:  2016-07-21       Impact factor: 5.182

5.  Cyclooxygenase reaction mechanism of PGHS--evidence for a reversible transition between a pentadienyl radical and a new tyrosyl radical by nitric oxide trapping.

Authors:  Jian-Ming Lü; Corina E Rogge; Gang Wu; Richard J Kulmacz; Wilfred A van der Donk; Ah-lim Tsai
Journal:  J Inorg Biochem       Date:  2011-03       Impact factor: 4.155

6.  Cyclooxygenase reaction mechanism of prostaglandin H synthase from deuterium kinetic isotope effects.

Authors:  Gang Wu; Jian-Ming Lü; Wilfred A van der Donk; Richard J Kulmacz; Ah-lim Tsai
Journal:  J Inorg Biochem       Date:  2011-03       Impact factor: 4.155

7.  The binding and release of oxygen and hydrogen peroxide are directed by a hydrophobic tunnel in cholesterol oxidase.

Authors:  Lin Chen; Artem Y Lyubimov; Leighanne Brammer; Alice Vrielink; Nicole S Sampson
Journal:  Biochemistry       Date:  2008-04-15       Impact factor: 3.162

8.  A Revised Mechanism for Human Cyclooxygenase-2.

Authors:  Yi Liu; Justine P Roth
Journal:  J Biol Chem       Date:  2015-11-12       Impact factor: 5.157

Review 9.  Prostaglandin H synthase: resolved and unresolved mechanistic issues.

Authors:  Ah-Lim Tsai; Richard J Kulmacz
Journal:  Arch Biochem Biophys       Date:  2009-09-01       Impact factor: 4.013

10.  Oxygen Sensing, Cardiac Ischemia, HIF-1α and Some Emerging Concepts.

Authors:  Shyamal K Goswami; Dipak K Das
Journal:  Curr Cardiol Rev       Date:  2010-11
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