Literature DB >> 17354851

Validation of image segmentation by estimating rater bias and variance.

Simon K Warfield1, Kelly H Zou, William M Wells.   

Abstract

The accuracy and precision of segmentations of medical images has been difficult to quantify in the absence of a "ground truth" or reference standard segmentation for clinical data. Although physical or digital phantoms can help by providing a reference standard, they do not allow the reproduction of the full range of imaging and anatomical characteristics observed in clinical data. An alternative assessment approach is to compare to segmentations generated by domain experts. Segmentations may be generated by raters who are trained experts or by automated image analysis algorithms. Typically these segmentations differ due to intra-rater and inter-rater variability. The most appropriate way to compare such segmentations has been unclear. We present here a new algorithm to enable the estimation of performance characteristics, and a true labeling, from observations of segmentations of imaging data where segmentation labels may be ordered or continuous measures. This approach may be used with, amongst others, surface, distance transform or level set representations of segmentations, and can be used to assess whether or not a rater consistently over-estimates or under-estimates the position of a boundary.

Mesh:

Year:  2006        PMID: 17354851     DOI: 10.1007/11866763_103

Source DB:  PubMed          Journal:  Med Image Comput Comput Assist Interv


  8 in total

1.  Using the logarithm of odds to define a vector space on probabilistic atlases.

Authors:  Kilian M Pohl; John Fisher; Sylvain Bouix; Martha Shenton; Robert W McCarley; W Eric L Grimson; Ron Kikinis; William M Wells
Journal:  Med Image Anal       Date:  2007-06-22       Impact factor: 8.545

2.  Statistical Fusion of Continuous Labels: Identification of Cardiac Landmarks.

Authors:  Fangxu Xing; Sahar Soleimanifard; Jerry L Prince; Bennett A Landman
Journal:  Proc SPIE Int Soc Opt Eng       Date:  2011-01-01

3.  Finding Seeds for Segmentation Using Statistical Fusion.

Authors:  Fangxu Xing; Andrew J Asman; Jerry L Prince; Bennett A Landman
Journal:  Proc SPIE Int Soc Opt Eng       Date:  2012-02-23

4.  A majority rule approach for region-of-interest-guided streamline fiber tractography.

Authors:  L M Colon-Perez; W Triplett; A Bohsali; M Corti; P T Nguyen; C Patten; T H Mareci; C C Price
Journal:  Brain Imaging Behav       Date:  2016-12       Impact factor: 3.978

5.  A continuous STAPLE for scalar, vector, and tensor images: an application to DTI analysis.

Authors:  Olivier Commowick; Simon K Warfield
Journal:  IEEE Trans Med Imaging       Date:  2008-12-09       Impact factor: 10.048

6.  Detection of DTI white matter abnormalities in multiple sclerosis patients.

Authors:  Olivier Commowick; Pierre Fillard; Olivier Clatz; Simon K Warfield
Journal:  Med Image Comput Comput Assist Interv       Date:  2008

7.  Validation of image segmentation by estimating rater bias and variance.

Authors:  Simon K Warfield; Kelly H Zou; William M Wells
Journal:  Philos Trans A Math Phys Eng Sci       Date:  2008-07-13       Impact factor: 4.226

8.  Deep learning-enabled multi-organ segmentation in whole-body mouse scans.

Authors:  Oliver Schoppe; Chenchen Pan; Javier Coronel; Hongcheng Mai; Zhouyi Rong; Mihail Ivilinov Todorov; Annemarie Müskes; Fernando Navarro; Hongwei Li; Ali Ertürk; Bjoern H Menze
Journal:  Nat Commun       Date:  2020-11-06       Impact factor: 14.919

  8 in total

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