Literature DB >> 17351042

Molecular genetics and genomic analysis of scytonemin biosynthesis in Nostoc punctiforme ATCC 29133.

Tanya Soule1, V Stout, W D Swingley, J C Meeks, F Garcia-Pichel.   

Abstract

The indole-alkaloid scytonemin is the most common and widespread sunscreen among cyanobacteria. Previous research has focused on its nature, distribution, ecology, physiology, and biochemistry, but its molecular genetics have not been explored. In this study, a scytonemin-deficient mutant of the cyanobacterium Nostoc punctiforme ATCC 29133 was obtained by random transposon insertion into open reading frame NpR1273. The absence of scytonemin under conditions of induction by UV irradiation was the single phenotypic difference detected in a comparative analysis of the wild type and the mutant. A cause-effect relationship between the phenotype and the mutation in NpR1273 was demonstrated by constructing a second scytoneminless mutant through directed mutagenesis of that gene. The genomic region flanking the mutation revealed an 18-gene cluster (NpR1276 to NpR1259). Four putative genes in the cluster, NpR1274 to NpR1271, with no previously known functions, are likely to be involved in the assembly of scytonemin. Also in this cluster, there is a redundant set of genes coding for shikimic acid and aromatic amino acid biosynthesis enzymes, leading to the production of tryptophan and tyrosine, which are likely to be biosynthetic precursors of the sunscreen.

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Year:  2007        PMID: 17351042      PMCID: PMC1913356          DOI: 10.1128/JB.01816-06

Source DB:  PubMed          Journal:  J Bacteriol        ISSN: 0021-9193            Impact factor:   3.490


  32 in total

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Authors:  A Krogh; B Larsson; G von Heijne; E L Sonnhammer
Journal:  J Mol Biol       Date:  2001-01-19       Impact factor: 5.469

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Journal:  Proteins       Date:  1992-10

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Journal:  Appl Environ Microbiol       Date:  1995-12       Impact factor: 4.792

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Journal:  J Mol Biol       Date:  1969-05-14       Impact factor: 5.469

5.  Analysis of a Het- mutation in Anabaena sp. strain PCC 7120 implicates a secondary metabolite in the regulation of heterocyst spacing.

Authors:  T A Black; C P Wolk
Journal:  J Bacteriol       Date:  1994-04       Impact factor: 3.490

6.  UV-inducible DNA repair in the cyanobacteria Anabaena spp.

Authors:  E Levine; T Thiel
Journal:  J Bacteriol       Date:  1987-09       Impact factor: 3.490

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Journal:  Photosynth Res       Date:  2001       Impact factor: 3.573

8.  Use of a transposon with luciferase as a reporter to identify environmentally responsive genes in a cyanobacterium.

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Journal:  Proc Natl Acad Sci U S A       Date:  1991-06-15       Impact factor: 11.205

9.  The membrane-bound bifunctional peptidylglycine alpha-amidating monooxygenase protein. Exploration of its domain structure through limited proteolysis.

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Journal:  J Biol Chem       Date:  1991-09-15       Impact factor: 5.157

10.  Lateral gene transfer and ancient paralogy of operons containing redundant copies of tryptophan-pathway genes in Xylella species and in heterocystous cyanobacteria.

Authors:  Gary Xie; Carol A Bonner; Tom Brettin; Raphael Gottardo; Nemat O Keyhani; Roy A Jensen
Journal:  Genome Biol       Date:  2003-01-29       Impact factor: 13.583

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  32 in total

Review 1.  Cohesion group approach for evolutionary analysis of TyrA, a protein family with wide-ranging substrate specificities.

Authors:  Carol A Bonner; Terrence Disz; Kaitlyn Hwang; Jian Song; Veronika Vonstein; Ross Overbeek; Roy A Jensen
Journal:  Microbiol Mol Biol Rev       Date:  2008-03       Impact factor: 11.056

2.  Gene expression patterns associated with the biosynthesis of the sunscreen scytonemin in Nostoc punctiforme ATCC 29133 in response to UVA radiation.

Authors:  Tanya Soule; Ferran Garcia-Pichel; Valerie Stout
Journal:  J Bacteriol       Date:  2009-05-08       Impact factor: 3.490

3.  Organization, evolution, and expression analysis of the biosynthetic gene cluster for scytonemin, a cyanobacterial UV-absorbing pigment.

Authors:  Carla M Sorrels; Philip J Proteau; William H Gerwick
Journal:  Appl Environ Microbiol       Date:  2009-05-29       Impact factor: 4.792

Review 4.  Discovering functional novelty in metagenomes: examples from light-mediated processes.

Authors:  Amoolya H Singh; Tobias Doerks; Ivica Letunic; Jeroen Raes; Peer Bork
Journal:  J Bacteriol       Date:  2008-10-10       Impact factor: 3.490

5.  Probing the in vivo biosynthesis of scytonemin, a cyanobacterial ultraviolet radiation sunscreen, through small scale stable isotope incubation studies and MALDI-TOF mass spectrometry.

Authors:  Carla S Jones; Eduardo Esquenazi; Pieter C Dorrestein; William H Gerwick
Journal:  Bioorg Med Chem       Date:  2011-06-14       Impact factor: 3.641

Review 6.  Microbial ultraviolet sunscreens.

Authors:  Qunjie Gao; Ferran Garcia-Pichel
Journal:  Nat Rev Microbiol       Date:  2011-10-03       Impact factor: 60.633

7.  Extracellular Polysaccharide Production in a Scytonemin-Deficient Mutant of Nostoc punctiforme Under UVA and Oxidative Stress.

Authors:  Tanya Soule; Dexter Shipe; Justin Lothamer
Journal:  Curr Microbiol       Date:  2016-06-15       Impact factor: 2.188

8.  Investigating the initial steps in the biosynthesis of cyanobacterial sunscreen scytonemin.

Authors:  Emily P Balskus; Christopher T Walsh
Journal:  J Am Chem Soc       Date:  2008-10-28       Impact factor: 15.419

9.  An enzymatic cyclopentyl[b]indole formation involved in scytonemin biosynthesis.

Authors:  Emily P Balskus; Christopher T Walsh
Journal:  J Am Chem Soc       Date:  2009-10-21       Impact factor: 15.419

10.  A comparative genomics approach to understanding the biosynthesis of the sunscreen scytonemin in cyanobacteria.

Authors:  Tanya Soule; Kendra Palmer; Qunjie Gao; Ruth M Potrafka; Valerie Stout; Ferran Garcia-Pichel
Journal:  BMC Genomics       Date:  2009-07-24       Impact factor: 3.969

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