Literature DB >> 1409568

Structural principles for the propeller assembly of beta-sheets: the preference for seven-fold symmetry.

A G Murzin1.   

Abstract

Twisted beta-sheets, packed face to face, may be arranged in circular formation like blades of a propeller or turbine. This beta-propeller fold has been found in three proteins: that in neuraminidase consists of six beta-sheets while those in methylamine dehydrogenase and galactose oxidase are composed of seven beta-sheets. A model for multisheet packing in the beta-propeller fold is proposed. This model gives both geometrical parameters of the beta-propellers composed of different numbers of sheets and patterns of residue packing at their sheet-to-sheet interfaces. All the known beta-propeller structures have been analyzed, and the observed geometries and residue packing are found to be in good agreement with those predicted by models. It is shown that unusual seven-fold symmetry is preferable to six- or eight-fold symmetry for propeller-like multi-sheet assembly. According to the model, a six-beta-sheet propeller has to have predominantly small residues in the beta-strands closed to its six-fold axis, but no strong sequence constraints are necessary for a seven-fold beta-propeller.

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Year:  1992        PMID: 1409568     DOI: 10.1002/prot.340140206

Source DB:  PubMed          Journal:  Proteins        ISSN: 0887-3585


  46 in total

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Journal:  EMBO J       Date:  2001-12-03       Impact factor: 11.598

2.  Tachylectin-2: crystal structure of a specific GlcNAc/GalNAc-binding lectin involved in the innate immunity host defense of the Japanese horseshoe crab Tachypleus tridentatus.

Authors:  H G Beisel; S Kawabata; S Iwanaga; R Huber; W Bode
Journal:  EMBO J       Date:  1999-05-04       Impact factor: 11.598

3.  Molecular genetics and genomic analysis of scytonemin biosynthesis in Nostoc punctiforme ATCC 29133.

Authors:  Tanya Soule; V Stout; W D Swingley; J C Meeks; F Garcia-Pichel
Journal:  J Bacteriol       Date:  2007-03-09       Impact factor: 3.490

4.  The structure of Rauvolfia serpentina strictosidine synthase is a novel six-bladed beta-propeller fold in plant proteins.

Authors:  Xueyan Ma; Santosh Panjikar; Juergen Koepke; Elke Loris; Joachim Stöckigt
Journal:  Plant Cell       Date:  2006-03-10       Impact factor: 11.277

5.  The carboxy terminal WD domain of the pre-mRNA splicing factor Prp17p is critical for function.

Authors:  L A Lindsey-Boltz; G Chawla; N Srinivasan; U Vijayraghavan; M A Garcia-Blanco
Journal:  RNA       Date:  2000-09       Impact factor: 4.942

6.  Atomic structure of clathrin: a beta propeller terminal domain joins an alpha zigzag linker.

Authors:  E ter Haar; A Musacchio; S C Harrison; T Kirchhausen
Journal:  Cell       Date:  1998-11-13       Impact factor: 41.582

Review 7.  Structure and function of WD40 domain proteins.

Authors:  Chao Xu; Jinrong Min
Journal:  Protein Cell       Date:  2011-04-06       Impact factor: 14.870

8.  A novel type of protein kinase phosphorylates actin in the actin-fragmin complex.

Authors:  L Eichinger; L Bomblies; J Vandekerckhove; M Schleicher; J Gettemans
Journal:  EMBO J       Date:  1996-10-15       Impact factor: 11.598

9.  Folding of the N-terminal, ligand-binding region of integrin alpha-subunits into a beta-propeller domain.

Authors:  T A Springer
Journal:  Proc Natl Acad Sci U S A       Date:  1997-01-07       Impact factor: 11.205

10.  How natalizumab binds and antagonizes α4 integrins.

Authors:  Yamei Yu; Thomas Schürpf; Timothy A Springer
Journal:  J Biol Chem       Date:  2013-09-18       Impact factor: 5.157

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