Literature DB >> 17335906

Computer automated movement detection for the analysis of behavior.

Roseanna B Ramazani1, Harish R Krishnan, Susan E Bergeson, Nigel S Atkinson.   

Abstract

Currently, measuring ethanol behaviors in flies depends on expensive image analysis software or time intensive experimental observation. We have designed an automated system for the collection and analysis of locomotor behavior data, using the IEEE 1394 acquisition program dvgrab, the image toolkit ImageMagick and the programming language Perl. In the proposed method, flies are placed in a clear container and a computer-controlled camera takes pictures at regular intervals. Digital subtraction removes the background and non-moving flies, leaving white pixels where movement has occurred. These pixels are tallied, giving a value that corresponds to the number of animals that have moved between images. Perl scripts automate these processes, allowing compatibility with high-throughput genetic screens. Four experiments demonstrate the utility of this method, the first showing heat-induced locomotor changes, the second showing tolerance to ethanol in a climbing assay, the third showing tolerance to ethanol by scoring the recovery of individual flies, and the fourth showing a mouse's preference for a novel object. Our lab will use this method to conduct a genetic screen for ethanol-induced hyperactivity and sedation, however, it could also be used to analyze locomotor behavior of any organism.

Entities:  

Mesh:

Year:  2007        PMID: 17335906      PMCID: PMC1950293          DOI: 10.1016/j.jneumeth.2007.01.005

Source DB:  PubMed          Journal:  J Neurosci Methods        ISSN: 0165-0270            Impact factor:   2.390


  22 in total

1.  Functional ethanol tolerance in Drosophila.

Authors:  H Scholz; J Ramond; C M Singh; U Heberlein
Journal:  Neuron       Date:  2000-10       Impact factor: 17.173

2.  A portrait of locomotor behaviour in Drosophila determined by a video-tracking paradigm.

Authors:  Jean-René Martin
Journal:  Behav Processes       Date:  2004-09-30       Impact factor: 1.777

3.  Drosophila fasciclinII is required for the formation of odor memories and for normal sensitivity to alcohol.

Authors:  Y Cheng; K Endo; K Wu; A R Rodan; U Heberlein; R L Davis
Journal:  Cell       Date:  2001-06-15       Impact factor: 41.582

4.  Rest in Drosophila is a sleep-like state.

Authors:  J C Hendricks; S M Finn; K A Panckeri; J Chavkin; J A Williams; A Sehgal; A I Pack
Journal:  Neuron       Date:  2000-01       Impact factor: 17.173

5.  High-resolution analysis of ethanol-induced locomotor stimulation in Drosophila.

Authors:  Fred W Wolf; Aylin R Rodan; Linus T-Y Tsai; Ulrike Heberlein
Journal:  J Neurosci       Date:  2002-12-15       Impact factor: 6.167

6.  Temperature-sensitive mutations in Drosophila melanogaster. VII. A mutation (para-ts) causing reversible adult paralysis.

Authors:  D T Suzuki; T Grigliatti; R Williamson
Journal:  Proc Natl Acad Sci U S A       Date:  1971-05       Impact factor: 11.205

7.  The slowpoke gene is necessary for rapid ethanol tolerance in Drosophila.

Authors:  R B Cowmeadow; H R Krishnan; N S Atkinson
Journal:  Alcohol Clin Exp Res       Date:  2005-10       Impact factor: 3.455

8.  Fighting fruit flies: a model system for the study of aggression.

Authors:  Selby Chen; Ann Yeelin Lee; Nina M Bowens; Robert Huber; Edward A Kravitz
Journal:  Proc Natl Acad Sci U S A       Date:  2002-04-16       Impact factor: 11.205

9.  Conditioned behavior in Drosophila melanogaster.

Authors:  W G Quinn; W A Harris; S Benzer
Journal:  Proc Natl Acad Sci U S A       Date:  1974-03       Impact factor: 11.205

10.  The inebri-actometer: a device for measuring the locomotor activity of Drosophila exposed to ethanol vapor.

Authors:  J Parr; A Large; X Wang; S C Fowler; K L Ratzlaff; D M Ruden
Journal:  J Neurosci Methods       Date:  2001-05-30       Impact factor: 2.987

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  23 in total

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Journal:  Ecotoxicology       Date:  2016-10-05       Impact factor: 2.823

2.  Tolerance to anesthesia depends on synaptic proteins.

Authors:  Yazan M Al-Hasan; Harish R Krishnan; Alfredo Ghezzi; Francisco J Prado; Roseanna B Robles; Nigel S Atkinson
Journal:  Behav Genet       Date:  2011-02-12       Impact factor: 2.805

3.  A histone modification identifies a DNA element controlling slo BK channel gene expression in muscle.

Authors:  Xiaolei Li; Alfredo Ghezzi; Harish R Krishnan; Jascha B Pohl; Arun Y Bohm; Nigel S Atkinson
Journal:  J Neurogenet       Date:  2015-07-13       Impact factor: 1.250

4.  Three-dimensional tracking and behaviour monitoring of multiple fruit flies.

Authors:  Reza Ardekani; Anurag Biyani; Justin E Dalton; Julia B Saltz; Michelle N Arbeitman; John Tower; Sergey Nuzhdin; Simon Tavaré
Journal:  J R Soc Interface       Date:  2012-10-03       Impact factor: 4.118

5.  Measuring glutathione-induced feeding response in hydra.

Authors:  Ram Kulkarni; Sanjeev Galande
Journal:  J Vis Exp       Date:  2014-11-16       Impact factor: 1.355

6.  A new chamber for studying the behavior of Drosophila.

Authors:  Jasper C Simon; Michael H Dickinson
Journal:  PLoS One       Date:  2010-01-27       Impact factor: 3.240

7.  SwarmSight: Measuring the temporal progression of animal group activity levels from natural-scene and laboratory videos.

Authors:  Justas Birgiolas; Christopher M Jernigan; Brian H Smith; Sharon M Crook
Journal:  Behav Res Methods       Date:  2017-04

8.  Functional mapping of the neuronal substrates for drug tolerance in Drosophila.

Authors:  Alfredo Ghezzi; Yazan M Al-Hasan; Harish R Krishnan; Yan Wang; Nigel S Atkinson
Journal:  Behav Genet       Date:  2013-02-01       Impact factor: 2.805

9.  An assay for evoked locomotor behavior in Drosophila reveals a role for integrins in ethanol sensitivity and rapid ethanol tolerance.

Authors:  Poonam Bhandari; Kenneth S Kendler; Jill C Bettinger; Andrew G Davies; Mike Grotewiel
Journal:  Alcohol Clin Exp Res       Date:  2009-07-23       Impact factor: 3.455

10.  High-throughput ethomics in large groups of Drosophila.

Authors:  Kristin Branson; Alice A Robie; John Bender; Pietro Perona; Michael H Dickinson
Journal:  Nat Methods       Date:  2009-05-03       Impact factor: 28.547

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