Literature DB >> 17327672

An extremely SAD case: structure of a putative redox-enzyme maturation protein from Archaeoglobus fulgidus at 3.4 A resolution.

Olga Kirillova1, Maksymilian Chruszcz, Igor A Shumilin, Tatiana Skarina, Elena Gorodichtchenskaia, Marcin Cymborowski, Alexei Savchenko, Aled Edwards, Wladek Minor.   

Abstract

This paper describes the crystal structure of AF0173, a putative redox-enzyme maturation protein (REMP) from Archaeoglobus fulgidus. The REMPs serve as chaperones in the maturation of extracytoplasmic oxidoreductases in archaea and bacteria. The all-helical subunits of AF0173 form a dimer arising from the interaction of residues located in a funnel-shaped cavity on one subunit surface with an uncut expression tag from the other subunit. This cavity is likely to represent a binding site for the twin-arginine motif that interacts with REMPs. The conservation of the overall fold in AF0173 and bacterial REMPs as well as the presence of conserved residues in their putative binding sites indicates that REMPs act in a similar manner in archaea and bacteria despite their limited sequence similarity. A model of the binding of the twin-arginine motif by AF0173 is suggested. The solution of the AF0173 structure by the single anomalous dispersion method represents an extreme case of SAD structure determination: low resolution (3.4 A), the absence of NCS and the presence of only two anomalously scattering atoms in the asymmetric unit. An unusually high solvent content (73%) turned out to be important for the success of the density-modification procedures.

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Year:  2007        PMID: 17327672     DOI: 10.1107/S0907444906055065

Source DB:  PubMed          Journal:  Acta Crystallogr D Biol Crystallogr        ISSN: 0907-4449


  10 in total

1.  New surface contacts formed upon reductive lysine methylation: improving the probability of protein crystallization.

Authors:  Pawel Sledz; Heping Zheng; Krzysztof Murzyn; Maksymilian Chruszcz; Matthew D Zimmerman; Mahendra D Chordia; Andrzej Joachimiak; Wladek Minor
Journal:  Protein Sci       Date:  2010-07       Impact factor: 6.725

2.  Analysis of solvent content and oligomeric states in protein crystals--does symmetry matter?

Authors:  Maksymilian Chruszcz; Wojciech Potrzebowski; Matthew D Zimmerman; Marek Grabowski; Heping Zheng; Piotr Lasota; Wladek Minor
Journal:  Protein Sci       Date:  2008-04       Impact factor: 6.725

3.  Structure of the twin-arginine signal-binding protein DmsD from Escherichia coli.

Authors:  Suresh Kumar Ramasamy; William M Clemons
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2009-07-21

4.  Double trouble-Buffer selection and His-tag presence may be responsible for nonreproducibility of biomedical experiments.

Authors:  Karolina A Majorek; Misty L Kuhn; Maksymilian Chruszcz; Wayne F Anderson; Wladek Minor
Journal:  Protein Sci       Date:  2014-07-30       Impact factor: 6.725

Review 5.  The mononuclear molybdenum enzymes.

Authors:  Russ Hille; James Hall; Partha Basu
Journal:  Chem Rev       Date:  2014-01-28       Impact factor: 60.622

6.  Optimization of overexpression of a chaperone protein of steroid C25 dehydrogenase for biochemical and biophysical characterization.

Authors:  Ewa Niedzialkowska; Beata Mrugała; Agnieszka Rugor; Mateusz P Czub; Anna Skotnicka; Julien J H Cotelesage; Graham N George; Maciej Szaleniec; Wladek Minor; Krzysztof Lewiński
Journal:  Protein Expr Purif       Date:  2017-03-23       Impact factor: 1.650

7.  Correct assembly of iron-sulfur cluster FS0 into Escherichia coli dimethyl sulfoxide reductase (DmsABC) is a prerequisite for molybdenum cofactor insertion.

Authors:  Huipo Tang; Richard A Rothery; James E Voss; Joel H Weiner
Journal:  J Biol Chem       Date:  2011-02-26       Impact factor: 5.157

8.  Structural analysis of a monomeric form of the twin-arginine leader peptide binding chaperone Escherichia coli DmsD.

Authors:  Charles M Stevens; Tara M L Winstone; Raymond J Turner; Mark Paetzel
Journal:  J Mol Biol       Date:  2009-04-08       Impact factor: 5.469

9.  Conserved signal peptide recognition systems across the prokaryotic domains.

Authors:  Sarah J Coulthurst; Alice Dawson; William N Hunter; Frank Sargent
Journal:  Biochemistry       Date:  2012-02-13       Impact factor: 3.162

10.  Conformational selection underlies recognition of a molybdoenzyme by its dedicated chaperone.

Authors:  Magali Lorenzi; Léa Sylvi; Guillaume Gerbaud; Elisabetta Mileo; Frédéric Halgand; Anne Walburger; Hervé Vezin; Valérie Belle; Bruno Guigliarelli; Axel Magalon
Journal:  PLoS One       Date:  2012-11-19       Impact factor: 3.240

  10 in total

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