Literature DB >> 1731927

Determination of the excited-state lifetimes of the tryptophan residues in barnase, via multifrequency phase fluorometry of tryptophan mutants.

K Willaert1, R Loewenthal, J Sancho, M Froeyen, A Fersht, Y Engelborghs.   

Abstract

A multifrequency phase fluorometric study is described for wild-type barnase and engineered mutant proteins in which tryptophan residues have been replaced by less fluorescent residues which do not interfere with the determination of the tryptophan emission spectra and lifetimes. The lifetimes of the three tryptophans in the wild-type protein have been resolved. Trp-35 has a single fluorescence lifetime, which varies in the different proteins between 4.3 and 4.8 ns and is pH-independent between pH 5.8 and 8.9. Trp-71 and Trp-94 behave as an energy-transfer couple with both forward and reverse energy transfer. The couple shows two fluorescence lifetimes: 2.42 (+/-0.2) and 0.74 (+/-0.1) ns at pH 8.9, and 0.89 (+/-0.05) and 0.65 (+/-0.05) ns at pH 5.8. In the mutant Trp-94----Phe the lifetime of Trp-71 is 4.73 (+/-0.008) ns at high pH and 4.70 (+/-0.004) ns at low pH. In the mutant Trp-71----Tyr, the lifetime of Trp-94 is 1.57 (+/-0.01) ns at high pH and 0.82 (+/-0.025) ns at low pH. From these lifetimes, one-way energy-transfer efficiencies can be calculated according to Porter [Porter, G.B. (1972) Theor. Chim. Acta 24, 265-270]. At pH 8.9, a 71% efficiency was found for forward transfer (from Trp-71 to Trp-94) and 36% for reverse transfer. At pH 5.8 the transfer efficiency was 86% for forward and 4% for reverse transfer (all +/-2%). These transfer efficiencies correspond fairly well with the ones calculated according to the theory of Förster [Förster, T. (1948) Ann. Phys. (Leipzig) 2, 55-75].(ABSTRACT TRUNCATED AT 250 WORDS)

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Year:  1992        PMID: 1731927     DOI: 10.1021/bi00118a011

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  10 in total

1.  HIV-1 integrase catalytic core: molecular dynamics and simulated fluorescence decays.

Authors:  C Laboulais; E Deprez; H Leh; J F Mouscadet; J C Brochon; M Le Bret
Journal:  Biophys J       Date:  2001-07       Impact factor: 4.033

2.  Protein simulations: the absorption spectrum of barnase point mutants.

Authors:  Ken R F Somers; Peter Krüger; Sylwia Bucikiewicz; Marc De Maeyer; Yves Engelborghs; Arnout Ceulemans
Journal:  Protein Sci       Date:  2004-07       Impact factor: 6.725

Review 3.  Utility and considerations of donor-donor energy migration as a fluorescence method for exploring protein structure-function.

Authors:  Stanislav Kalinin; Lennart B A Johansson
Journal:  J Fluoresc       Date:  2004-11       Impact factor: 2.217

4.  Tryptophan-tryptophan energy transfer and classification of tryptophan residues in proteins using a therapeutic monoclonal antibody as a model.

Authors:  Veysel Kayser; Naresh Chennamsetty; Vladimir Voynov; Bernhard Helk; Bernhardt L Trout
Journal:  J Fluoresc       Date:  2010-10-01       Impact factor: 2.217

5.  Picosecond fluorescence dynamics of tryptophan and 5-fluorotryptophan in monellin: slow water-protein relaxation unmasked.

Authors:  Jianhua Xu; Binbin Chen; Patrik Callis; Pedro L Muiño; Henriëtte Rozeboom; Jaap Broos; Dmitri Toptygin; Ludwig Brand; Jay R Knutson
Journal:  J Phys Chem B       Date:  2015-03-04       Impact factor: 2.991

6.  Time-resolved fluorescence investigation of the human immunodeficiency virus type 1 nucleocapsid protein: influence of the binding of nucleic acids.

Authors:  E Bombarda; A Ababou; C Vuilleumier; D Gérard; B P Roques; E Piémont; Y Mély
Journal:  Biophys J       Date:  1999-03       Impact factor: 4.033

7.  The dead-end elimination method, tryptophan rotamers, and fluorescence lifetimes.

Authors:  Mario Hellings; Marc De Maeyer; Stefan Verheyden; Qiang Hao; Els J M Van Damme; Willy J Peumans; Yves Engelborghs
Journal:  Biophys J       Date:  2003-09       Impact factor: 4.033

8.  Contribution of single tryptophan residues to the fluorescence and stability of ribonuclease Sa.

Authors:  Roy W Alston; Lubica Urbanikova; Jozef Sevcik; Mauricio Lasagna; Gregory D Reinhart; J Martin Scholtz; C Nick Pace
Journal:  Biophys J       Date:  2004-09-17       Impact factor: 4.033

9.  Tryptophan properties in fluorescence and functional stability of plasminogen activator inhibitor 1.

Authors:  Stefan Verheyden; Alain Sillen; Ann Gils; Paul J Declerck; Yves Engelborghs
Journal:  Biophys J       Date:  2003-07       Impact factor: 4.033

10.  Mechanism of the efficient tryptophan fluorescence quenching in human gammaD-crystallin studied by time-resolved fluorescence.

Authors:  Jiejin Chen; Dmitri Toptygin; Ludwig Brand; Jonathan King
Journal:  Biochemistry       Date:  2008-09-17       Impact factor: 3.162

  10 in total

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