Literature DB >> 17309255

A simple model system for the study of carbohydrate--aromatic interactions.

Giancarlo Terraneo1, Donatella Potenza, Angeles Canales, Jesus Jiménez-Barbero, Kim K Baldridge, Anna Bernardi.   

Abstract

A molecular scaffold was identified which enables the establishment of intramolecular interactions between a monosaccharide and a nearby phenyl ring. A group of molecules containing four different monosaccharides (glucose, galactose, N-acetyl-glucosamine, and N-acetyl-galactosamine) was synthesized and used to investigate the extent and nature of this carbohydrate-arene interaction, as well as the effect on the overall 3D structure of the molecules involved. The sugar-aromatic distance was evaluated by rigorous NMR studies supported by molecular modeling and found to be constant throughout the series, independent of the nature of the sugar and of the conformational behavior of the fragment connecting the two elements. Ab initio calculations at the B3LYP/DZV(2d,p) level of theory enable the analysis of the electronic nature of the interaction. The study shows that, given the opportunity, persistent intramolecular aromatic-sugar interactions can be established and can significantly influence overall molecular shape and energetics. These results have important implications in the design of structural mimics of oligosaccharides.

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Year:  2007        PMID: 17309255     DOI: 10.1021/ja066633g

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  15 in total

1.  Multiple functions of aromatic-carbohydrate interactions in a processive cellulase examined with molecular simulation.

Authors:  Christina M Payne; Yannick J Bomble; Courtney B Taylor; Clare McCabe; Michael E Himmel; Michael F Crowley; Gregg T Beckham
Journal:  J Biol Chem       Date:  2011-09-29       Impact factor: 5.157

2.  Synthesis, crystal structure and investigation of mononuclear copper(II) and zinc(II) complexes of a new carboxylate rich tripodal ligand and their interaction with carbohydrates in alkaline aqueous solution.

Authors:  Christopher D Stewart; Mayra Pedraza; Hadi Arman; Hua-Jun Fan; Eduardo Luiz Schilling; Bruno Szpoganicz; Ghezai T Musie
Journal:  J Inorg Biochem       Date:  2015-04-30       Impact factor: 4.155

3.  Structural and energetic basis of carbohydrate-aromatic packing interactions in proteins.

Authors:  Wentao Chen; Sebastian Enck; Joshua L Price; David L Powers; Evan T Powers; Chi-Huey Wong; H Jane Dyson; Jeffery W Kelly
Journal:  J Am Chem Soc       Date:  2013-06-19       Impact factor: 15.419

4.  The interaction of La(3+) complexes of DOTA/DTPA glycoconjugates with the RCA(120) lectin: a saturation transfer difference NMR spectroscopic study.

Authors:  João M C Teixeira; David M Dias; F Javier Cañada; José A Martins; João P André; Jesús Jiménez-Barbero; Carlos F G C Geraldes
Journal:  J Biol Inorg Chem       Date:  2011-04-03       Impact factor: 3.358

Review 5.  Carbohydrate recognition by boronolectins, small molecules, and lectins.

Authors:  Shan Jin; Yunfeng Cheng; Suazette Reid; Minyong Li; Binghe Wang
Journal:  Med Res Rev       Date:  2010-03       Impact factor: 12.944

6.  Recognition properties of receptors consisting of imidazole and indole recognition units towards carbohydrates.

Authors:  Monika Mazik; André Hartmann
Journal:  Beilstein J Org Chem       Date:  2010-02-02       Impact factor: 2.883

7.  Carbohydrate-pi interactions: what are they worth?

Authors:  Zachary R Laughrey; Sarah E Kiehna; Alex J Riemen; Marcey L Waters
Journal:  J Am Chem Soc       Date:  2008-10-10       Impact factor: 15.419

Review 8.  Progress in biomimetic carbohydrate recognition.

Authors:  D Barney Walker; Gururaj Joshi; Anthony P Davis
Journal:  Cell Mol Life Sci       Date:  2009-07-07       Impact factor: 9.261

9.  Through-Space Effects of Substituents Dominate Molecular Electrostatic Potentials of Substituted Arenes.

Authors:  Steven E Wheeler; K N Houk
Journal:  J Chem Theory Comput       Date:  2009-09-08       Impact factor: 6.006

10.  Stacking interactions between carbohydrate and protein quantified by combination of theoretical and experimental methods.

Authors:  Michaela Wimmerová; Stanislav Kozmon; Ivona Nečasová; Sushil Kumar Mishra; Jan Komárek; Jaroslav Koča
Journal:  PLoS One       Date:  2012-10-08       Impact factor: 3.240

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