Literature DB >> 17291183

Gas-phase spectroscopy of biomolecular building blocks.

Mattanjah S de Vries1, Pavel Hobza.   

Abstract

Gas-phase spectroscopy lends itself ideally to the study of isolated molecules and provides important data for comparison with theory. In recent years, we have seen enormous progress in the study of biomolecular building blocks in the gas phase. The motivation for such work is threefold: (a) It is important to distinguish between intrinsic molecular properties and properties that result from the biological environment. (b) Gas-phase spectroscopy of clusters provides insights into fundamental interactions and into microsolvation. (c) Gas-phase data support quantum-chemical calculations. This review focuses on the current status of (poly)amino acids and DNA bases. Recent results help elucidate structure and hydrogen-bonded interactions, as well as showcase a successful interplay between theory and experiment.

Entities:  

Mesh:

Substances:

Year:  2007        PMID: 17291183     DOI: 10.1146/annurev.physchem.57.032905.104722

Source DB:  PubMed          Journal:  Annu Rev Phys Chem        ISSN: 0066-426X            Impact factor:   12.703


  30 in total

1.  N-H stretching modes of adenosine monomer in solution studied by ultrafast nonlinear infrared spectroscopy and ab initio calculations.

Authors:  Christian Greve; Nicholas K Preketes; Rene Costard; Benjamin Koeppe; Henk Fidder; Erik T J Nibbering; Friedrich Temps; Shaul Mukamel; Thomas Elsaesser
Journal:  J Phys Chem A       Date:  2012-07-18       Impact factor: 2.781

2.  Quantum chemical studies of nucleic acids: can we construct a bridge to the RNA structural biology and bioinformatics communities?

Authors:  Jiří Šponer; Judit E Šponer; Anton I Petrov; Neocles B Leontis
Journal:  J Phys Chem B       Date:  2010-11-04       Impact factor: 2.991

3.  N-H stretching excitations in adenosine-thymidine base pairs in solution: pair geometries, infrared line shapes, and ultrafast vibrational dynamics.

Authors:  Christian Greve; Nicholas K Preketes; Henk Fidder; Rene Costard; Benjamin Koeppe; Ismael A Heisler; Shaul Mukamel; Friedrich Temps; Erik T J Nibbering; Thomas Elsaesser
Journal:  J Phys Chem A       Date:  2013-01-07       Impact factor: 2.781

4.  Peptide deactivation: Spectroscopy meets theory.

Authors:  Wolfgang Domcke; Andrzej L Sobolewski
Journal:  Nat Chem       Date:  2013-04       Impact factor: 24.427

5.  Toward a Rational Design of Highly Folded Peptide Cation Conformations. 3D Gas-Phase Ion Structures and Ion Mobility Characterization.

Authors:  Robert Pepin; Kenneth J Laszlo; Aleš Marek; Bo Peng; Matthew F Bush; Helène Lavanant; Carlos Afonso; František Tureček
Journal:  J Am Soc Mass Spectrom       Date:  2016-07-11       Impact factor: 3.109

Review 6.  Microscopic Characterization of Membrane Transporter Function by In Silico Modeling and Simulation.

Authors:  J V Vermaas; N Trebesch; C G Mayne; S Thangapandian; M Shekhar; P Mahinthichaichan; J L Baylon; T Jiang; Y Wang; M P Muller; E Shinn; Z Zhao; P-C Wen; E Tajkhorshid
Journal:  Methods Enzymol       Date:  2016-07-11       Impact factor: 1.600

7.  Ionization of dimethyluracil dimers leads to facile proton transfer in the absence of hydrogen bonds.

Authors:  Amir Golan; Ksenia B Bravaya; Romas Kudirka; Oleg Kostko; Stephen R Leone; Anna I Krylov; Musahid Ahmed
Journal:  Nat Chem       Date:  2012-03-18       Impact factor: 24.427

Review 8.  RNA Structural Dynamics As Captured by Molecular Simulations: A Comprehensive Overview.

Authors:  Jiří Šponer; Giovanni Bussi; Miroslav Krepl; Pavel Banáš; Sandro Bottaro; Richard A Cunha; Alejandro Gil-Ley; Giovanni Pinamonti; Simón Poblete; Petr Jurečka; Nils G Walter; Michal Otyepka
Journal:  Chem Rev       Date:  2018-01-03       Impact factor: 60.622

9.  Fourier transform microwave spectroscopy of Ac-Ser-NH2: the role of side chain interactions in peptide folding.

Authors:  Carlos Cabezas; Martinus A T Robben; Anouk M Rijs; Isabel Peña; J L Alonso
Journal:  Phys Chem Chem Phys       Date:  2015-08-21       Impact factor: 3.676

10.  Time-resolved infrared spectroscopy of the lowest triplet state of thymine and thymidine.

Authors:  Patrick M Hare; Chris T Middleton; Kristin I Mertel; John M Herbert; Bern Kohler
Journal:  Chem Phys       Date:  2008-05-23       Impact factor: 2.348

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.