Literature DB >> 17284012

Acceleration of microwave-assisted enzymatic digestion reactions by magnetite beads.

Wei-Yu Chen1, Yu-Chie Chen.   

Abstract

In this study, we demonstrated that microwave-assisted enzymatic digestion could be greatly accelerated by multifunctional magnetite beads. The acceleration of microwave-assisted enzymatic digestion by the presence of the magnetite beads was attributable to several features of the beads. Their capacity to absorb microwave radiation leads to rapid heating of the beads. Furthermore, their negatively charged functionalities cause adsorption of proteins with opposite charges onto their surfaces by electrostatic interactions, leading to a concentration on the surfaces of the beads of proteins present in trace amounts in the solution. The adsorbed proteins are denatured and hence rendered vulnerable to enzymatic digestion and are digested on the beads. For microwave heating, 30 s was sufficient for carrying out the tryptic digestion of cytochrome c, in the presence of magnetite beads, while 1 min was adequate for tryptic digestion of myoglobin. The digestion products were characterized by MALDI-MS. This rapid enzymatic digestion allowed the entire time for identification of proteins to be greatly reduced. Furthermore, specific proteins present in trace quantities were enriched from the sample on the magnetite beads and could be rapidly isolated from the sample by employing an external magnetic field. These multiple roles of magnetite beads, as the absorber for microwave irradiation, the concentrating probe, and the agent for unfolding proteins, contributed to their capability of accelerating microwave-assisted enzymatic digestion. We also demonstrated that trypsin immobilized magnetite beads were suitable for use in microwave-assisted enzymatic digestion.

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Year:  2007        PMID: 17284012     DOI: 10.1021/ac0614893

Source DB:  PubMed          Journal:  Anal Chem        ISSN: 0003-2700            Impact factor:   6.986


  12 in total

1.  Digestion completeness of microwave-assisted and conventional trypsin-catalyzed reactions.

Authors:  P Muralidhar Reddy; Wan-Yu Hsu; Jun-Fu Hu; Yen-Peng Ho
Journal:  J Am Soc Mass Spectrom       Date:  2009-12-04       Impact factor: 3.109

2.  Digestion of native proteins for proteomics using a thermocycler.

Authors:  Obolbek A Turapov; Galina V Mukamolova; Andrew R Bottrill; Michael K Pangburn
Journal:  Anal Chem       Date:  2008-06-26       Impact factor: 6.986

Review 3.  Protein analysis by shotgun/bottom-up proteomics.

Authors:  Yaoyang Zhang; Bryan R Fonslow; Bing Shan; Moon-Chang Baek; John R Yates
Journal:  Chem Rev       Date:  2013-02-26       Impact factor: 60.622

4.  Uncovering immobilized trypsin digestion features from large-scale proteome data generated by high-resolution mass spectrometry.

Authors:  Liangliang Sun; Guijie Zhu; Xiaojing Yan; Si Mou; Norman J Dovichi
Journal:  J Chromatogr A       Date:  2014-02-22       Impact factor: 4.759

5.  Reproducible microwave-assisted acid hydrolysis of proteins using a household microwave oven and its combination with LC-ESI MS/MS for mapping protein sequences and modifications.

Authors:  Nan Wang; Liang Li
Journal:  J Am Soc Mass Spectrom       Date:  2010-04-24       Impact factor: 3.109

6.  Microwave and magnetic (M(2) ) proteomics of the experimental autoimmune encephalomyelitis animal model of multiple sclerosis.

Authors:  Itay Raphael; Swetha Mahesula; Karan Kalsaria; Venkat Kotagiri; Anjali B Purkar; Manjushree Anjanappa; Darshit Shah; Vidya Pericherla; Yeshwant Lal Avinash Jadhav; Rekha Raghunathan; Michael Vaynberg; David Noriega; Nazul H Grimaldo; Carola Wenk; Jonathan A L Gelfond; Thomas G Forsthuber; William E Haskins
Journal:  Electrophoresis       Date:  2012-12       Impact factor: 3.535

7.  High efficiency and quantitatively reproducible protein digestion by trypsin-immobilized magnetic microspheres.

Authors:  Liangliang Sun; Yihan Li; Ping Yang; Guijie Zhu; Norman J Dovichi
Journal:  J Chromatogr A       Date:  2011-12-02       Impact factor: 4.759

8.  Trypsin coatings on electrospun and alcohol-dispersed polymer nanofibers for a trypsin digestion column.

Authors:  Seung-Hyun Jun; Mun Seock Chang; Byoung Chan Kim; Hyo Jin An; Daniel Lopez-Ferrer; Rui Zhao; Richard D Smith; Sang-Won Lee; Jungbae Kim
Journal:  Anal Chem       Date:  2010-09-15       Impact factor: 6.986

9.  Highly stable trypsin-aggregate coatings on polymer nanofibers for repeated protein digestion.

Authors:  Byoung Chan Kim; Daniel Lopez-Ferrer; Sang-Mok Lee; Hye-Kyung Ahn; Sujith Nair; Seong H Kim; Beom Soo Kim; Konstantinos Petritis; David G Camp; Jay W Grate; Richard D Smith; Yoon-Mo Koo; Man Bock Gu; Jungbae Kim
Journal:  Proteomics       Date:  2009-04       Impact factor: 3.984

Review 10.  Porous polymer monoliths: amazingly wide variety of techniques enabling their preparation.

Authors:  Frantisek Svec
Journal:  J Chromatogr A       Date:  2009-10-02       Impact factor: 4.759

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