Literature DB >> 17278583

Tracking spike-amplitude changes to improve the quality of multineuronal data analysis.

Hidekazu Kaneko1, Hiroshi Tamura, Shinya S Suzuki.   

Abstract

During extracellular electrophysiological recording experiments, the waveform of neuronal spikes recorded from a single neuron often changes. These spike-waveform changes make single-neuron identification difficult, particularly when the activities of multiple neurons are simultaneously recorded with a multichannel microelectrode, such as a tetrode or a heptode. We have developed a tracking method of individual neurons despite their changing spike amplitudes. The method is based on a bottom-up hierarchical clustering algorithm that tracks each neuron's spike cluster during temporally overlapping clustering periods. We evaluated this method by comparing spike sorting with and without cluster tracking of an identical series of multineuronal spikes recorded from monkey area-TE neurons responding to a set of visual stimuli. According to Shannon's information theory, errors in spike-amplitude tracking reduce the expected value of the amount of information about a stimulus set that is transferred by the spike train of a cluster. In this study, cluster tracking significantly increased the expected value of the amount of information transferred by a spike train (p < 0.01). Additionally, the stability of the stimulus preference and that of the cross-correlation between clusters improved significantly (p < 0.000001). We conclude that cluster tracking improves the quality of multineuronal data analysis.

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Year:  2007        PMID: 17278583     DOI: 10.1109/TBME.2006.886934

Source DB:  PubMed          Journal:  IEEE Trans Biomed Eng        ISSN: 0018-9294            Impact factor:   4.538


  7 in total

1.  An automatic measure for classifying clusters of suspected spikes into single cells versus multiunits.

Authors:  Ariel Tankus; Yehezkel Yeshurun; Itzhak Fried
Journal:  J Neural Eng       Date:  2009-08-07       Impact factor: 5.379

2.  Correspondence between Monkey Visual Cortices and Layers of a Saliency Map Model Based on a Deep Convolutional Neural Network for Representations of Natural Images.

Authors:  Nobuhiko Wagatsuma; Akinori Hidaka; Hiroshi Tamura
Journal:  eNeuro       Date:  2021-02-09

3.  In vivo neuronal action potential recordings via three-dimensional microscale needle-electrode arrays.

Authors:  Akifumi Fujishiro; Hidekazu Kaneko; Takahiro Kawashima; Makoto Ishida; Takeshi Kawano
Journal:  Sci Rep       Date:  2014-05-02       Impact factor: 4.379

4.  Single 5 μm diameter needle electrode block modules for unit recordings in vivo.

Authors:  H Sawahata; S Yamagiwa; A Moriya; T Dong; H Oi; Y Ando; R Numano; M Ishida; K Koida; T Kawano
Journal:  Sci Rep       Date:  2016-10-25       Impact factor: 4.379

5.  Inflammatory cytokine-induced changes in neural network activity measured by waveform analysis of high-content calcium imaging in murine cortical neurons.

Authors:  Benjamin D S Clarkson; Robert J Kahoud; Christina B McCarthy; Charles L Howe
Journal:  Sci Rep       Date:  2017-08-22       Impact factor: 4.379

6.  Population coding of figure and ground in natural image patches by V4 neurons.

Authors:  Yukako Yamane; Atsushi Kodama; Motofumi Shishikura; Kouji Kimura; Hiroshi Tamura; Ko Sakai
Journal:  PLoS One       Date:  2020-06-26       Impact factor: 3.240

7.  Latency shortening with enhanced sparseness and responsiveness in V1 during active visual sensing.

Authors:  Junji Ito; Cristian Joana; Yukako Yamane; Ichiro Fujita; Hiroshi Tamura; Pedro E Maldonado; Sonja Grün
Journal:  Sci Rep       Date:  2022-04-11       Impact factor: 4.379

  7 in total

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