Literature DB >> 17275132

Reciprocal gene loss between Tetraodon and zebrafish after whole genome duplication in their ancestor.

Marie Sémon1, Kenneth H Wolfe.   

Abstract

The whole genome duplication that occurred in ray-finned fish coincided with the radiation of teleost species; consequently, these two phenomena have often been linked. Using the Tetraodon and zebrafish complete genome sequences, we tested a molecular hypothesis that can relate whole genome duplication to speciation in teleosts. We estimate that thousands of genes that remained duplicated when Tetraodon and zebrafish diverged underwent reciprocal loss subsequently in these two species, probably contributing to reproductive isolation between them.

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Year:  2007        PMID: 17275132     DOI: 10.1016/j.tig.2007.01.003

Source DB:  PubMed          Journal:  Trends Genet        ISSN: 0168-9525            Impact factor:   11.639


  50 in total

1.  Evolution of gene function and regulatory control after whole-genome duplication: comparative analyses in vertebrates.

Authors:  Karin S Kassahn; Vinh T Dang; Simon J Wilkins; Andrew C Perkins; Mark A Ragan
Journal:  Genome Res       Date:  2009-05-13       Impact factor: 9.043

2.  Retinal homeobox 1 is required for retinal neurogenesis and photoreceptor differentiation in embryonic zebrafish.

Authors:  Steve M Nelson; Leon Park; Deborah L Stenkamp
Journal:  Dev Biol       Date:  2009-01-10       Impact factor: 3.582

3.  Genomic organization, expression, and phylogenetic analysis of Ca2+ channel beta4 genes in 13 vertebrate species.

Authors:  Alicia M Ebert; Catherine A McAnelly; Anne V Handschy; Rachel Lockridge Mueller; William A Horne; Deborah M Garrity
Journal:  Physiol Genomics       Date:  2008-08-05       Impact factor: 3.107

Review 4.  The evolutionary significance of ancient genome duplications.

Authors:  Yves Van de Peer; Steven Maere; Axel Meyer
Journal:  Nat Rev Genet       Date:  2009-08-04       Impact factor: 53.242

Review 5.  Gene and genome duplications: the impact of dosage-sensitivity on the fate of nuclear genes.

Authors:  Patrick P Edger; J Chris Pires
Journal:  Chromosome Res       Date:  2009       Impact factor: 5.239

6.  Comprehensive clarification of two paralogous interleukin 4/13 loci in teleost fish.

Authors:  Maki Ohtani; Nobuhiro Hayashi; Keiichiro Hashimoto; Teruyuki Nakanishi; Johannes Martinus Dijkstra
Journal:  Immunogenetics       Date:  2008-06-17       Impact factor: 2.846

7.  Comparative genomic analysis of teleost fish bmal genes.

Authors:  Han Wang
Journal:  Genetica       Date:  2008-10-14       Impact factor: 1.082

8.  Consequences of lineage-specific gene loss on functional evolution of surviving paralogs: ALDH1A and retinoic acid signaling in vertebrate genomes.

Authors:  Cristian Cañestro; Julian M Catchen; Adriana Rodríguez-Marí; Hayato Yokoi; John H Postlethwait
Journal:  PLoS Genet       Date:  2009-05-29       Impact factor: 5.917

9.  Synorth: exploring the evolution of synteny and long-range regulatory interactions in vertebrate genomes.

Authors:  Xianjun Dong; David Fredman; Boris Lenhard
Journal:  Genome Biol       Date:  2009-08-21       Impact factor: 13.583

Review 10.  In ovo omnia: diversification by duplication in fish and other vertebrates.

Authors:  Ingo Braasch; Walter Salzburger
Journal:  J Biol       Date:  2009-03-05
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