Literature DB >> 17269705

Analytical aspects of plant metabolite profiling platforms: current standings and future aims.

Christoph Seger1, Sonja Sturm.   

Abstract

Over the past years, metabolic profiling has been established as a comprehensive systems biology tool. Mass spectrometry or NMR spectroscopy-based technology platforms combined with unsupervised or supervised multivariate statistical methodologies allow a deep insight into the complex metabolite patterns of plant-derived samples. Within this review, we provide a thorough introduction to the analytical hard- and software requirements of metabolic profiling platforms. Methodological limitations are addressed, and the metabolic profiling workflow is exemplified by summarizing recent applications ranging from model systems to more applied topics.

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Year:  2007        PMID: 17269705     DOI: 10.1021/pr0604716

Source DB:  PubMed          Journal:  J Proteome Res        ISSN: 1535-3893            Impact factor:   4.466


  11 in total

1.  NMR-based metabolomic analysis of plants.

Authors:  Hye Kyong Kim; Young Hae Choi; Robert Verpoorte
Journal:  Nat Protoc       Date:  2010-02-25       Impact factor: 13.491

2.  1H nuclear magnetic resonance-based extracellular metabolomic analysis of multidrug resistant Tca8113 oral squamous carcinoma cells.

Authors:  Hui Wang; Jiao Chen; Yun Feng; Wenjie Zhou; Jihua Zhang; Y U Yu; Xiaoqian Wang; Ping Zhang
Journal:  Oncol Lett       Date:  2015-04-21       Impact factor: 2.967

Review 3.  Isolation and analysis of ginseng: advances and challenges.

Authors:  Lian-Wen Qi; Chong-Zhi Wang; Chun-Su Yuan
Journal:  Nat Prod Rep       Date:  2011-01-24       Impact factor: 13.423

Review 4.  Metabolomics in the fields of oncology: a review of recent research.

Authors:  Yanlei Ma; Peng Zhang; Yongzhi Yang; Feng Wang; Huanlong Qin
Journal:  Mol Biol Rep       Date:  2012-02-16       Impact factor: 2.316

5.  Proposal for field sampling of plants and processing in the lab for environmental metabolic fingerprinting.

Authors:  Tanja S Maier; Jürgen Kuhn; Caroline Müller
Journal:  Plant Methods       Date:  2010-01-29       Impact factor: 4.993

6.  Metabolic fingerprinting of Leontopodium species (Asteraceae) by means of ¹H NMR and HPLC-ESI-MS.

Authors:  Stefan Safer; Serhat S Cicek; Valerio Pieri; Stefan Schwaiger; Peter Schneider; Volker Wissemann; Hermann Stuppner
Journal:  Phytochemistry       Date:  2011-08       Impact factor: 4.072

Review 7.  Untargeted metabolomics: an emerging approach to determine the composition of herbal products.

Authors:  Mauro Commisso; Pamela Strazzer; Ketti Toffali; Matteo Stocchero; Flavia Guzzo
Journal:  Comput Struct Biotechnol J       Date:  2013-02-28       Impact factor: 7.271

Review 8.  Metabolomics of genetically modified crops.

Authors:  Carolina Simó; Clara Ibáñez; Alberto Valdés; Alejandro Cifuentes; Virginia García-Cañas
Journal:  Int J Mol Sci       Date:  2014-10-20       Impact factor: 5.923

Review 9.  Biotechnological approaches to study plant responses to stress.

Authors:  Rosa M Pérez-Clemente; Vicente Vives; Sara I Zandalinas; María F López-Climent; Valeria Muñoz; Aurelio Gómez-Cadenas
Journal:  Biomed Res Int       Date:  2012-12-30       Impact factor: 3.411

10.  Genetic manipulation of putrescine biosynthesis reprograms the cellular transcriptome and the metabolome.

Authors:  Andrew F Page; Leland J Cseke; Rakesh Minocha; Swathi A Turlapati; Gopi K Podila; Alexander Ulanov; Zhong Li; Subhash C Minocha
Journal:  BMC Plant Biol       Date:  2016-05-18       Impact factor: 4.215

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