Literature DB >> 17246311

Localization in the Tomato Genome of DNA Restriction Fragments Containing Sequences Homologous to the rRNA (45s), the Major Chlorophyll a/b Binding Polypeptide and the Ribulose Bisphosphate Carboxylase Genes.

C E Vallejos1, S D Tanksley, R Bernatzky.   

Abstract

DNA restriction fragments containing sequences homologous to the ribosomal RNA (45s), the major chlorophyll a/b binding polypeptide (CAB) and the small subunit of ribulose bisphosphate carboxylase (RBCS) genes have been localized and mapped in the tomato nuclear genome by linkage analysis. Ribosomal RNA genes map to a single locus, R45s, which resides in a terminal position on the short arm of chromosome 2 and corresponds to the Nucleolar Organizer Region. The size of the 45s repeating unit is estimated to be approximately 9 kb in Lycopersicon esculentum and 11 kb in Lycopersicon pennellii. Five loci were found to contain CAB sequences. Two of the loci, Cab-1 (chromosome 2) and Cab-3 (chromosome 8), together accounted for more than 80% of the hybridization signal. These loci contain more than one CAB structural gene. The other three loci, Cab-2 (chromosome 8), Cab-4 (chromosome 7) and Cab-5 (chromosome 12), each account for <10% of the total signal and may contain only a single copy of the CAB structural sequence. Three loci were found to contain RBCS sequences. Rbcs-2 (chromosome 3) and Rbcs-3 (chromosome 2) were responsible for >80% of the signal, with the remainder being associated with Rbcs-1 (chromosome 2). Rbcs-2 and Rbcs-3 may contain more than one copy of the gene.

Entities:  

Year:  1986        PMID: 17246311      PMCID: PMC1202693     

Source DB:  PubMed          Journal:  Genetics        ISSN: 0016-6731            Impact factor:   4.562


  36 in total

1.  Construction of a yeast artificial chromosome library of tomato and identification of cloned segments linked to two disease resistance loci.

Authors:  G B Martin; M W Ganal; S D Tanksley
Journal:  Mol Gen Genet       Date:  1992-05

2.  High density molecular linkage maps of the tomato and potato genomes.

Authors:  S D Tanksley; M W Ganal; J P Prince; M C de Vicente; M W Bonierbale; P Broun; T M Fulton; J J Giovannoni; S Grandillo; G B Martin
Journal:  Genetics       Date:  1992-12       Impact factor: 4.562

3.  Ribosomal RNA genes in plants: variability in copy number and in the intergenic spacer.

Authors:  S O Rogers; A J Bendich
Journal:  Plant Mol Biol       Date:  1987-09       Impact factor: 4.076

4.  The tomato Cab-4 and Cab-5 genes encode a second type of CAB polypeptides localized in Photosystem II.

Authors:  E Pichersky; N E Hoffman; V S Malik; R Bernatzky; S D Tanksley; L Szabo; A R Cashmore
Journal:  Plant Mol Biol       Date:  1987-03       Impact factor: 4.076

5.  Genetics of actin-related sequences in tomato.

Authors:  R Bernatzky; S D Tanksley
Journal:  Theor Appl Genet       Date:  1986-06       Impact factor: 5.699

6.  RFLP maps of potato and their alignment with the homoeologous tomato genome.

Authors:  C Gebhardt; E Ritter; A Barone; T Debener; B Walkemeier; U Schachtschabel; H Kaufmann; R D Thompson; M W Bonierbale; M W Ganal; S D Tanksley; F Salamini
Journal:  Theor Appl Genet       Date:  1991-11       Impact factor: 5.699

7.  RFLP inheritance and linkage in walnut.

Authors:  R G Fjellstrom; D E Parfitt
Journal:  Theor Appl Genet       Date:  1994-11       Impact factor: 5.699

8.  High resolution physical mapping of 45S (5.8S, 18S and 25S) rDNA gene loci in the tomato genome using a combination of karyotyping and FISH of pachytene chromosomes.

Authors:  J Xu; E D Earle
Journal:  Chromosoma       Date:  1996-06       Impact factor: 4.316

9.  Level of expression of the tomato rbcS-3A gene is modulated by a far upstream promoter element in a developmentally regulated manner.

Authors:  T Ueda; E Pichersky; V S Malik; A R Cashmore
Journal:  Plant Cell       Date:  1989-02       Impact factor: 11.277

10.  Chromosomal localization and genomic organization of α-amylase genes in rice (Oryza sativa L.).

Authors:  S Ranjhan; J C Litts; M R Foolad; R L Rodriguez
Journal:  Theor Appl Genet       Date:  1991-07       Impact factor: 5.699

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