Literature DB >> 17246178

Analyses of the age of genes and the first arrival times in a finite population.

T Maruyama1, P A Fuerst.   

Abstract

The age of a mutant gene is studied using the infinite allele model in which every mutant is new and selectively neutral. Based on a time reversal theory of Markov processes, we develop a method of mathematical analysis that is considerably simpler for calculating the various statistics of the age than previous methods. Formulas for the mean and variance and for the distribution of age are presented together with some examples of relevance to cases in natural populations.-Theoretical studies of the first arrival time of an allele to a specified frequency, given an initially monomorphic condition of the locus, are presented. It is shown that, beginning with an allele that has frequency p = 1 or an allele with frequency p = 1/2N, there is an initial lag phase in which there is virtually no chance of an allele with a specified intermediate frequency appearing in the population. The distribution of the first arrival time is also presented. The distribution shows several characteristics that are not immediately obvious from a consideration of only the mean and variance of first arrival time. Especially noteworthy is the existence of a very long tail to the distribution. We have also studied the distribution of the age of an allele in the population. Again, the distribution of this measure is shown to be more informative for several questions than are the mean and variance alone.

Year:  1983        PMID: 17246178      PMCID: PMC1202224     

Source DB:  PubMed          Journal:  Genetics        ISSN: 0016-6731            Impact factor:   4.562


  9 in total

1.  THE NUMBER OF ALLELES THAT CAN BE MAINTAINED IN A FINITE POPULATION.

Authors:  M KIMURA; J F CROW
Journal:  Genetics       Date:  1964-04       Impact factor: 4.562

2.  Moments for sum of an arbitrary function of gene frequency along a stochastic path of gene frequency change.

Authors:  T Maruyama; M Kimura
Journal:  Proc Natl Acad Sci U S A       Date:  1975-04       Impact factor: 11.205

3.  Statistical Studies on Protein Polymorphism in Natural Populations. III. Distribution of Allele Frequencies and the Number of Alleles per Locus.

Authors:  R Chakraborty; P A Fuerst; M Nei
Journal:  Genetics       Date:  1980-04       Impact factor: 4.562

4.  Electrophoretic variation in intertidal and subtidal organisms in Puget Sound, Washington.

Authors:  A G Johnson; F M Utter
Journal:  Anim Blood Groups Biochem Genet       Date:  1976

5.  Reversibility and the age of an allele. II. Two-allele models, with selection and mutation.

Authors:  G A Watterson
Journal:  Theor Popul Biol       Date:  1977-10       Impact factor: 1.570

6.  Eukaryotes-prokaryotes divergence estimated by 5S ribosomal RNA sequences.

Authors:  M Kimura; T Ohta
Journal:  Nat New Biol       Date:  1973-06-13

7.  The moments of stochastic integrals and the distribution of sojourn times.

Authors:  T Nagylaki
Journal:  Proc Natl Acad Sci U S A       Date:  1974-03       Impact factor: 11.205

8.  The sampling theory of selectively neutral alleles.

Authors:  W J Ewens
Journal:  Theor Popul Biol       Date:  1972-03       Impact factor: 1.570

9.  Elephant seals: genetic variation and near extinction.

Authors:  M L Bonnel; R K Selander
Journal:  Science       Date:  1974-05-24       Impact factor: 47.728

  9 in total
  1 in total

1.  Population bottlenecks and nonequilibrium models in population genetics. I. Allele numbers when populations evolve from zero variability.

Authors:  T Maruyama; P A Fuerst
Journal:  Genetics       Date:  1984-11       Impact factor: 4.562

  1 in total

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