Literature DB >> 17243487

Bioinformatics approaches in glycomics and drug discovery.

Kiyoko F Aoki-Kinoshita1, Minoru Kanehisa.   

Abstract

Within the field of bioinformatics, interest in glycan structures has increased steadily since the start of the 21st century, with several databases worldwide accumulating data. The most notable publicly available databases are KEGG GLYCAN in Japan, glycoSCIENCES.de in Germany and that of the Consortium for Functional Glycomics in the US. With this increasing abundance of data, there are greater possibilities for applying tree-based models and algorithms to glycan structure data. Research in this area of glycome informatics is reviewed. The combination of these datasets and informatics techniques to enable extraction of the most important (and perhaps the most interesting) information--the links between glycans and diseases, and the identification of biomarkers and drug targets--is discussed.

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Year:  2006        PMID: 17243487

Source DB:  PubMed          Journal:  Curr Opin Mol Ther        ISSN: 1464-8431


  9 in total

1.  The fine specificity of mannose-binding and galactose-binding lectins revealed using outlier motif analysis of glycan array data.

Authors:  Kevin A Maupin; Daniel Liden; Brian B Haab
Journal:  Glycobiology       Date:  2011-08-29       Impact factor: 4.313

2.  Enhancement of cyclopamine via conjugation with nonmetabolic sugars.

Authors:  Randal D Goff; Jon S Thorson
Journal:  Org Lett       Date:  2012-04-27       Impact factor: 6.005

Review 3.  Bioinformatics and molecular modeling in glycobiology.

Authors:  Martin Frank; Siegfried Schloissnig
Journal:  Cell Mol Life Sci       Date:  2010-04-04       Impact factor: 9.261

4.  Distinct N-glycan glycosylation of P-glycoprotein isolated from the human uterine sarcoma cell line MES-SA/Dx5.

Authors:  D A Greer; S Ivey
Journal:  Biochim Biophys Acta       Date:  2007-07-19

5.  The use of glycoinformatics in glycochemistry.

Authors:  Thomas Lütteke
Journal:  Beilstein J Org Chem       Date:  2012-06-21       Impact factor: 2.883

6.  Understanding the relationship between cotton fiber properties and non-cellulosic cell wall polysaccharides.

Authors:  Dhivyaa Rajasundaram; Jean-Luc Runavot; Xiaoyuan Guo; William G T Willats; Frank Meulewaeter; Joachim Selbig
Journal:  PLoS One       Date:  2014-11-10       Impact factor: 3.240

7.  Positive-unlabelled learning of glycosylation sites in the human proteome.

Authors:  Fuyi Li; Yang Zhang; Anthony W Purcell; Geoffrey I Webb; Kuo-Chen Chou; Trevor Lithgow; Chen Li; Jiangning Song
Journal:  BMC Bioinformatics       Date:  2019-03-06       Impact factor: 3.169

Review 8.  Insights into Bioinformatic Applications for Glycosylation: Instigating an Awakening towards Applying Glycoinformatic Resources for Cancer Diagnosis and Therapy.

Authors:  Manikandan Muthu; Sechul Chun; Judy Gopal; Vimala Anthonydhason; Steve W Haga; Anna Jacintha Prameela Devadoss; Jae-Wook Oh
Journal:  Int J Mol Sci       Date:  2020-12-08       Impact factor: 5.923

Review 9.  Bioinformatics Accelerates the Major Tetrad: A Real Boost for the Pharmaceutical Industry.

Authors:  Tapan Behl; Ishnoor Kaur; Aayush Sehgal; Sukhbir Singh; Saurabh Bhatia; Ahmed Al-Harrasi; Gokhan Zengin; Elena Emilia Babes; Ciprian Brisc; Manuela Stoicescu; Mirela Marioara Toma; Cristian Sava; Simona Gabriela Bungau
Journal:  Int J Mol Sci       Date:  2021-06-08       Impact factor: 5.923

  9 in total

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