Literature DB >> 17240047

Nuclear receptors and chromatin remodeling machinery.

Kevin W Trotter1, Trevor K Archer.   

Abstract

Eukaryotic genetic information is stored within the association of DNA and histone proteins resulting in a dynamic polymer called chromatin. The fundamental structural unit of chromatin is the nucleosome which consists of approximately 146 bp of DNA wrapped around an octamer of histones containing two copies each of four core histones, H2A, H2B, H3 and H4. It is this DNA/protein fiber that transcription factors and other agents of chromatin metabolism must access and regulate. We have developed model systems to study the mechanisms by which steroid receptors control physiological activities by regulating gene expression within a higher order chromatin organization. Our studies have focused on the glucocorticoid receptor and its ability to remodel chromatin which is mediated by the BRG1 complex. Using novel cell systems, we demonstrate that GR-mediated transactivation from chromatin templates requires BRG1 remodeling activity and that other ATP-dependent remodeling proteins cannot substitute for this activity.

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Year:  2007        PMID: 17240047      PMCID: PMC3582388          DOI: 10.1016/j.mce.2006.12.015

Source DB:  PubMed          Journal:  Mol Cell Endocrinol        ISSN: 0303-7207            Impact factor:   4.102


  52 in total

1.  ISWI is an ATP-dependent nucleosome remodeling factor.

Authors:  D F Corona; G Längst; C R Clapier; E J Bonte; S Ferrari; J W Tamkun; P B Becker
Journal:  Mol Cell       Date:  1999-02       Impact factor: 17.970

Review 2.  Transcriptional regulation by histone ubiquitination and deubiquitination.

Authors:  Yi Zhang
Journal:  Genes Dev       Date:  2003-11-15       Impact factor: 11.361

Review 3.  ATP-dependent chromatin remodeling complexes and their role in nuclear receptor-dependent transcription in vivo.

Authors:  Sayura Aoyagi; Kevin W Trotter; Trevor K Archer
Journal:  Vitam Horm       Date:  2005       Impact factor: 3.421

4.  The human SWI/SNF subunit Brm is a regulator of alternative splicing.

Authors:  Eric Batsché; Moshe Yaniv; Christian Muchardt
Journal:  Nat Struct Mol Biol       Date:  2005-12-11       Impact factor: 15.369

5.  PBAF chromatin-remodeling complex requires a novel specificity subunit, BAF200, to regulate expression of selective interferon-responsive genes.

Authors:  Zhijiang Yan; Kairong Cui; Darryl M Murray; Chen Ling; Yutong Xue; Amy Gerstein; Ramon Parsons; Keji Zhao; Weidong Wang
Journal:  Genes Dev       Date:  2005-06-28       Impact factor: 11.361

6.  Model-based analysis of tiling-arrays for ChIP-chip.

Authors:  W Evan Johnson; Wei Li; Clifford A Meyer; Raphael Gottardo; Jason S Carroll; Myles Brown; X Shirley Liu
Journal:  Proc Natl Acad Sci U S A       Date:  2006-08-08       Impact factor: 11.205

Review 7.  Heterochromatin assembly: a new twist on an old model.

Authors:  Peter J Horn; Craig L Peterson
Journal:  Chromosome Res       Date:  2006       Impact factor: 5.239

8.  Swapping function of two chromatin remodeling complexes.

Authors:  Hua-Ying Fan; Kevin W Trotter; Trevor K Archer; Robert E Kingston
Journal:  Mol Cell       Date:  2005-03-18       Impact factor: 17.970

9.  The SWI/SNF chromatin remodeling subunit BAF57 is a critical regulator of estrogen receptor function in breast cancer cells.

Authors:  Juana M García-Pedrero; Evangelos Kiskinis; Malcolm G Parker; Borja Belandia
Journal:  J Biol Chem       Date:  2006-06-12       Impact factor: 5.157

10.  Chromatin immunoprecipitation (ChIP) scanning identifies primary glucocorticoid receptor target genes.

Authors:  Jen-Chywan Wang; Mika Kakefuda Derynck; Daisuke F Nonaka; Daniel B Khodabakhsh; Chris Haqq; Keith R Yamamoto
Journal:  Proc Natl Acad Sci U S A       Date:  2004-10-22       Impact factor: 11.205

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  43 in total

Review 1.  Emerging roles of the 26S proteasome in nuclear hormone receptor-regulated transcription.

Authors:  Brian R Keppler; Trevor K Archer; H Karimi Kinyamu
Journal:  Biochim Biophys Acta       Date:  2010-08-20

Review 2.  Dynamics of coactivator recruitment and chromatin modifications during nuclear receptor mediated transcription.

Authors:  Sayura Aoyagi; Trevor K Archer
Journal:  Mol Cell Endocrinol       Date:  2007-09-05       Impact factor: 4.102

Review 3.  Mammalian circadian clock and metabolism - the epigenetic link.

Authors:  Marina Maria Bellet; Paolo Sassone-Corsi
Journal:  J Cell Sci       Date:  2010-11-15       Impact factor: 5.285

4.  Regulation of hippocampal H3 histone methylation by acute and chronic stress.

Authors:  Richard G Hunter; Katharine J McCarthy; Thomas A Milne; Donald W Pfaff; Bruce S McEwen
Journal:  Proc Natl Acad Sci U S A       Date:  2009-11-23       Impact factor: 11.205

Review 5.  Hijacking the chromatin remodeling machinery: impact of SWI/SNF perturbations in cancer.

Authors:  Bernard Weissman; Karen E Knudsen
Journal:  Cancer Res       Date:  2009-10-20       Impact factor: 12.701

6.  The SWI/SNF ATPase Brm is a gatekeeper of proliferative control in prostate cancer.

Authors:  Hui Shen; Nathan Powers; Nitin Saini; Clay E S Comstock; Ankur Sharma; Katherine Weaver; Monica P Revelo; William Gerald; Erin Williams; Walter J Jessen; Bruce J Aronow; Gary Rosson; Bernard Weissman; Christian Muchardt; Moshe Yaniv; Karen E Knudsen
Journal:  Cancer Res       Date:  2008-12-15       Impact factor: 12.701

7.  BRG1, the ATPase subunit of SWI/SNF chromatin remodeling complex, interacts with HDAC2 to modulate telomerase expression in human cancer cells.

Authors:  Shu Wu; Yuanlong Ge; Laiqiang Huang; Haiying Liu; Yong Xue; Yong Zhao
Journal:  Cell Cycle       Date:  2014       Impact factor: 4.534

8.  Epigenetic mechanisms modulate thyroid transcription factor 1-mediated transcription of the surfactant protein B gene.

Authors:  Yuxia Cao; Tiffany Vo; Guetchyn Millien; Jean-Bosco Tagne; Darrell Kotton; Robert J Mason; Mary C Williams; Maria I Ramirez
Journal:  J Biol Chem       Date:  2009-11-10       Impact factor: 5.157

9.  Prognostic and therapeutic potential of nuclear receptors in head and neck squamous cell carcinomas.

Authors:  Shirley K Knauer
Journal:  J Oncol       Date:  2009-09-24       Impact factor: 4.375

10.  Long-range activation of FKBP51 transcription by the androgen receptor via distal intronic enhancers.

Authors:  Harri Makkonen; Miia Kauhanen; Ville Paakinaho; Tiina Jääskeläinen; Jorma J Palvimo
Journal:  Nucleic Acids Res       Date:  2009-05-11       Impact factor: 16.971

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