Literature DB >> 16506098

Heterochromatin assembly: a new twist on an old model.

Peter J Horn1, Craig L Peterson.   

Abstract

The organization of eukaryotic genomes requires a harmony between efficient compaction and accessibility. This is achieved through its packaging into chromatin. Chromatin can be subdivided into two general structural and functional compartments: euchromatin and heterochromatin. Euchromatin comprises most of the expressed genome, while heterochromatin participates intimately in the production of structures such as centromeres and telomeres essential for chromosome function. Studies in the fission yeast Schizosaccharomyces pombe have begun to highlight the genetic pathways critical for the assembly and epigenetic maintenance of heterochromatin, including key roles played by the RNAi machinery, H3 lysine 9 methylation and heterochromatin protein 1 (HP1). Recent studies have also identified a novel E3 ubiquitin ligase universally required for H3 K9 methylation. Here we outline these studies and propose several models for the role of this E3 ligase in heterochromatin assembly.

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Year:  2006        PMID: 16506098     DOI: 10.1007/s10577-005-1018-1

Source DB:  PubMed          Journal:  Chromosome Res        ISSN: 0967-3849            Impact factor:   5.239


  67 in total

1.  Role of histone H3 lysine 9 methylation in epigenetic control of heterochromatin assembly.

Authors:  J Nakayama ; J C Rice; B D Strahl; C D Allis; S I Grewal
Journal:  Science       Date:  2001-03-15       Impact factor: 47.728

2.  A chromodomain protein, Swi6, performs imprinting functions in fission yeast during mitosis and meiosis.

Authors:  J Nakayama; A J Klar; S I Grewal
Journal:  Cell       Date:  2000-04-28       Impact factor: 41.582

Review 3.  Regulatory events in early and late B-cell differentiation.

Authors:  Kristen Johnson; Miriam Shapiro-Shelef; Chainarong Tunyaplin; Kathryn Calame
Journal:  Mol Immunol       Date:  2005-01-20       Impact factor: 4.407

4.  Ubiquitin ligase component Cul4 associates with Clr4 histone methyltransferase to assemble heterochromatin.

Authors:  Songtao Jia; Ryuji Kobayashi; Shiv I S Grewal
Journal:  Nat Cell Biol       Date:  2005-08-28       Impact factor: 28.824

5.  Chromosomal inheritance of epigenetic states in fission yeast during mitosis and meiosis.

Authors:  S I Grewal; A J Klar
Journal:  Cell       Date:  1996-07-12       Impact factor: 41.582

6.  Telomere binding protein Taz1 establishes Swi6 heterochromatin independently of RNAi at telomeres.

Authors:  Junko Kanoh; Mahito Sadaie; Takeshi Urano; Fuyuki Ishikawa
Journal:  Curr Biol       Date:  2005-10-25       Impact factor: 10.834

7.  Ubiquitination of histone H2B regulates H3 methylation and gene silencing in yeast.

Authors:  Zu-Wen Sun; C David Allis
Journal:  Nature       Date:  2002-06-23       Impact factor: 49.962

8.  Proteolysis-independent regulation of the transcription factor Met4 by a single Lys 48-linked ubiquitin chain.

Authors:  Karin Flick; Ikram Ouni; James A Wohlschlegel; Chrissy Capati; W Hayes McDonald; John R Yates; Peter Kaiser
Journal:  Nat Cell Biol       Date:  2004-06-20       Impact factor: 28.824

9.  A chromodomain protein, Chp1, is required for the establishment of heterochromatin in fission yeast.

Authors:  Mahito Sadaie; Tetsushi Iida; Takeshi Urano; Jun-Ichi Nakayama
Journal:  EMBO J       Date:  2004-09-16       Impact factor: 11.598

10.  Regulation of heterochromatic silencing and histone H3 lysine-9 methylation by RNAi.

Authors:  Thomas A Volpe; Catherine Kidner; Ira M Hall; Grace Teng; Shiv I S Grewal; Robert A Martienssen
Journal:  Science       Date:  2002-08-22       Impact factor: 47.728

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  23 in total

Review 1.  Nuclear receptors and chromatin remodeling machinery.

Authors:  Kevin W Trotter; Trevor K Archer
Journal:  Mol Cell Endocrinol       Date:  2007-01-19       Impact factor: 4.102

2.  Gene and genon concept: coding versus regulation. A conceptual and information-theoretic analysis of genetic storage and expression in the light of modern molecular biology.

Authors:  Klaus Scherrer; Jürgen Jost
Journal:  Theory Biosci       Date:  2007-09-22       Impact factor: 1.919

Review 3.  Roles of dynamic and reversible histone acetylation in plant development and polyploidy.

Authors:  Z Jeffrey Chen; Lu Tian
Journal:  Biochim Biophys Acta       Date:  2007-05-03

4.  Automethylation of G9a and its implication in wider substrate specificity and HP1 binding.

Authors:  Hang Gyeong Chin; Pierre-Olivier Estève; Mihika Pradhan; Jack Benner; Debasis Patnaik; Michael F Carey; Sriharsa Pradhan
Journal:  Nucleic Acids Res       Date:  2007-10-25       Impact factor: 16.971

5.  Class I histone deacetylase Thd1p promotes global chromatin condensation in Tetrahymena thermophila.

Authors:  Kathryn Parker; Julia Maxson; Alissa Mooney; Emily A Wiley
Journal:  Eukaryot Cell       Date:  2007-08-22

6.  Interaction of APC/C-E3 ligase with Swi6/HP1 and Clr4/Suv39 in heterochromatin assembly in fission yeast.

Authors:  Rudra Narayan Dubey; Nandni Nakwal; Kamlesh Kumar Bisht; Ashok Saini; Swati Haldar; Jagmohan Singh
Journal:  J Biol Chem       Date:  2008-12-30       Impact factor: 5.157

7.  Histone chaperones link histone nuclear import and chromatin assembly.

Authors:  Kristin M Keck; Lucy F Pemberton
Journal:  Biochim Biophys Acta       Date:  2011-10-08

8.  Maternal cannabis use alters ventral striatal dopamine D2 gene regulation in the offspring.

Authors:  Jennifer A DiNieri; Xinyu Wang; Henrietta Szutorisz; Sabrina M Spano; Jasbir Kaur; Patrizia Casaccia; Diana Dow-Edwards; Yasmin L Hurd
Journal:  Biol Psychiatry       Date:  2011-08-05       Impact factor: 13.382

9.  Functional cooperation between HP1 and DNMT1 mediates gene silencing.

Authors:  Andrea Smallwood; Pierre-Olivier Estève; Sriharsa Pradhan; Michael Carey
Journal:  Genes Dev       Date:  2007-04-30       Impact factor: 11.361

Review 10.  Epigenetic regulation in human brain-focus on histone lysine methylation.

Authors:  Schahram Akbarian; Hsien-Sung Huang
Journal:  Biol Psychiatry       Date:  2008-09-24       Impact factor: 13.382

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