Literature DB >> 17237200

A probability density approach to modeling local control of calcium-induced calcium release in cardiac myocytes.

George S B Williams1, Marco A Huertas, Eric A Sobie, M Saleet Jafri, Gregory D Smith.   

Abstract

We present a probability density approach to modeling localized Ca2+ influx via L-type Ca2+ channels and Ca2+-induced Ca2+ release mediated by clusters of ryanodine receptors during excitation-contraction coupling in cardiac myocytes. Coupled advection-reaction equations are derived relating the time-dependent probability density of subsarcolemmal subspace and junctional sarcoplasmic reticulum [Ca2+] conditioned on "Ca2+ release unit" state. When these equations are solved numerically using a high-resolution finite difference scheme and the resulting probability densities are coupled to ordinary differential equations for the bulk myoplasmic and sarcoplasmic reticulum [Ca2+], a realistic but minimal model of cardiac excitation-contraction coupling is produced. Modeling Ca2+ release unit activity using this probability density approach avoids the computationally demanding task of resolving spatial aspects of global Ca2+ signaling, while accurately representing heterogeneous local Ca2+ signals in a population of diadic subspaces and junctional sarcoplasmic reticulum depletion domains. The probability density approach is validated for a physiologically realistic number of Ca2+ release units and benchmarked for computational efficiency by comparison to traditional Monte Carlo simulations. In simulated voltage-clamp protocols, both the probability density and Monte Carlo approaches to modeling local control of excitation-contraction coupling produce high-gain Ca2+ release that is graded with changes in membrane potential, a phenomenon not exhibited by so-called "common pool" models. However, a probability density calculation can be significantly faster than the corresponding Monte Carlo simulation, especially when cellular parameters are such that diadic subspace [Ca2+] is in quasistatic equilibrium with junctional sarcoplasmic reticulum [Ca2+] and, consequently, univariate rather than multivariate probability densities may be employed.

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Year:  2007        PMID: 17237200      PMCID: PMC1864826          DOI: 10.1529/biophysj.106.099861

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  34 in total

1.  Modeling short-term interval-force relations in cardiac muscle.

Authors:  J J Rice; M S Jafri; R L Winslow
Journal:  Am J Physiol Heart Circ Physiol       Date:  2000-03       Impact factor: 4.733

2.  Luminal Ca2+ controls termination and refractory behavior of Ca2+-induced Ca2+ release in cardiac myocytes.

Authors:  Dmitry Terentyev; Serge Viatchenko-Karpinski; Héctor H Valdivia; Ariel L Escobar; Sandor Györke
Journal:  Circ Res       Date:  2002-09-06       Impact factor: 17.367

3.  Mechanisms of excitation-contraction coupling in an integrative model of the cardiac ventricular myocyte.

Authors:  Joseph L Greenstein; Robert Hinch; Raimond L Winslow
Journal:  Biophys J       Date:  2005-10-07       Impact factor: 4.033

4.  Three-dimensional distribution of ryanodine receptor clusters in cardiac myocytes.

Authors:  Ye Chen-Izu; Stacey L McCulle; Chris W Ward; Christian Soeller; Bryan M Allen; Cal Rabang; Mark B Cannell; C William Balke; Leighton T Izu
Journal:  Biophys J       Date:  2006-04-07       Impact factor: 4.033

5.  The dynamics of luminal depletion and the stochastic gating of Ca2+-activated Ca2+ channels and release sites.

Authors:  Marco A Huertas; Gregory D Smith
Journal:  J Theor Biol       Date:  2007-01-11       Impact factor: 2.691

6.  Two-dimensional confocal images of organization, density, and gating of focal Ca2+ release sites in rat cardiac myocytes.

Authors:  L Cleemann; W Wang; M Morad
Journal:  Proc Natl Acad Sci U S A       Date:  1998-09-01       Impact factor: 11.205

7.  Model of calcium-induced calcium release mechanism in cardiac cells.

Authors:  A Y Wong; A Fabiato; J B Bassingthwaighthe
Journal:  Bull Math Biol       Date:  1992-01       Impact factor: 1.758

8.  Time and calcium dependence of activation and inactivation of calcium-induced release of calcium from the sarcoplasmic reticulum of a skinned canine cardiac Purkinje cell.

Authors:  A Fabiato
Journal:  J Gen Physiol       Date:  1985-02       Impact factor: 4.086

9.  The control of calcium release in heart muscle.

Authors:  M B Cannell; H Cheng; W J Lederer
Journal:  Science       Date:  1995-05-19       Impact factor: 47.728

10.  Ratio of ryanodine to dihydropyridine receptors in cardiac and skeletal muscle and implications for E-C coupling.

Authors:  D M Bers; V M Stiffel
Journal:  Am J Physiol       Date:  1993-06
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  17 in total

1.  Timescales of IP(3)-evoked Ca(2+) spikes emerge from Ca(2+) puffs only at the cellular level.

Authors:  Kevin Thurley; Ian F Smith; Stephen C Tovey; Colin W Taylor; Ian Parker; Martin Falcke
Journal:  Biophys J       Date:  2011-12-07       Impact factor: 4.033

2.  Dynamics of calcium sparks and calcium leak in the heart.

Authors:  George S B Williams; Aristide C Chikando; Hoang-Trong M Tuan; Eric A Sobie; W J Lederer; M Saleet Jafri
Journal:  Biophys J       Date:  2011-09-20       Impact factor: 4.033

3.  Ca2+ alternans in a cardiac myocyte model that uses moment equations to represent heterogeneous junctional SR Ca2+.

Authors:  Marco A Huertas; Gregory D Smith; Sándor Györke
Journal:  Biophys J       Date:  2010-07-21       Impact factor: 4.033

4.  Moment closure for local control models of calcium-induced calcium release in cardiac myocytes.

Authors:  George S B Williams; Marco A Huertas; Eric A Sobie; M Saleet Jafri; Gregory D Smith
Journal:  Biophys J       Date:  2008-05-16       Impact factor: 4.033

Review 5.  Models of cardiac excitation-contraction coupling in ventricular myocytes.

Authors:  George S B Williams; Gregory D Smith; Eric A Sobie; M Saleet Jafri
Journal:  Math Biosci       Date:  2010-03-25       Impact factor: 2.144

6.  Concise Whole-Cell Modeling of BKCa-CaV Activity Controlled by Local Coupling and Stoichiometry.

Authors:  Francesco Montefusco; Alessia Tagliavini; Marco Ferrante; Morten Gram Pedersen
Journal:  Biophys J       Date:  2017-06-06       Impact factor: 4.033

Review 7.  Decoding myocardial Ca²⁺ signals across multiple spatial scales: a role for sensitivity analysis.

Authors:  Young-Seon Lee; Ona Z Liu; Eric A Sobie
Journal:  J Mol Cell Cardiol       Date:  2012-09-28       Impact factor: 5.000

8.  How does the ryanodine receptor in the ventricular myocyte wake up: by a single or by multiple open L-type Ca2+ channels?

Authors:  Thomas Schendel; Rüdiger Thul; James Sneyd; Martin Falcke
Journal:  Eur Biophys J       Date:  2011-10-01       Impact factor: 1.733

Review 9.  Integrative systems models of cardiac excitation-contraction coupling.

Authors:  Joseph L Greenstein; Raimond L Winslow
Journal:  Circ Res       Date:  2011-01-07       Impact factor: 17.367

10.  Ryanodine receptor allosteric coupling and the dynamics of calcium sparks.

Authors:  Jeffrey R Groff; Gregory D Smith
Journal:  Biophys J       Date:  2008-03-21       Impact factor: 4.033

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