Literature DB >> 17236650

Dimensions of systems biology.

S Huang1, J Wikswo.   

Abstract

Systems biology, possibly the latest sub-discipline of biology, has arisen as a result of the shockwave of genomic and proteomic data that has appeared in the past few years. However, despite ubiquitous initiatives that carry this label, there is no precise definition of systems biology other than the implication of a new, all-encompassing, multidisciplinary endeavor. Here we propose that systems biology is more than the integration of biology with methods of the physical and computational sciences, and also more than the expansion of the single-pathway approach to embracing genome-scale networks. It is the discipline that specifically addresses the fundamental properties of the complexity that living systems represent. To facilitate the discussion, we dissect and project the multifaceted systems complexity of living organisms into five dimensions: (1) molecular complexity; (2) structural complexity; (3) temporal complexity; (4) abstraction and emergence; and (5) algorithmic complexity. This "five-dimensional space" may provide a framework for comparing, classifying, and complementing the vast diversity of existing systems biology programs and their goals, and will also give a glimpse of the magnitude of the scientific problems associated with unraveling the ultimate mysteries of life.

Mesh:

Year:  2006        PMID: 17236650     DOI: 10.1007/112_0602

Source DB:  PubMed          Journal:  Rev Physiol Biochem Pharmacol        ISSN: 0303-4240            Impact factor:   5.545


  8 in total

1.  A nonlinear dynamical theory of cell injury.

Authors:  Donald J DeGracia; Zhi-Feng Huang; Sui Huang
Journal:  J Cereb Blood Flow Metab       Date:  2012-03-07       Impact factor: 6.200

Review 2.  Systems biology of stem cells: three useful perspectives to help overcome the paradigm of linear pathways.

Authors:  Sui Huang
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2011-08-12       Impact factor: 6.237

3.  Unraveling human complexity and disease with systems biology and personalized medicine.

Authors:  Stephen Naylor; Jake Y Chen
Journal:  Per Med       Date:  2010-05       Impact factor: 2.512

4.  Integrating Mass Spectrometry with Microphysiological Systems for Improved Neurochemical Studies.

Authors:  Emily G Tillmaand; Jonathan V Sweedler
Journal:  Microphysiol Syst       Date:  2018-06-11

Review 5.  Quintessential risk factors: their role in promoting cognitive dysfunction and Alzheimer's disease.

Authors:  Mak Adam Daulatzai
Journal:  Neurochem Res       Date:  2012-08-12       Impact factor: 3.996

6.  Characterizing ion mobility-mass spectrometry conformation space for the analysis of complex biological samples.

Authors:  Larissa S Fenn; Michal Kliman; Ablatt Mahsut; Sophie R Zhao; John A McLean
Journal:  Anal Bioanal Chem       Date:  2009-02-27       Impact factor: 4.142

Review 7.  Non-genetic heterogeneity--a mutation-independent driving force for the somatic evolution of tumours.

Authors:  Amy Brock; Hannah Chang; Sui Huang
Journal:  Nat Rev Genet       Date:  2009-05       Impact factor: 53.242

Review 8.  How implementation of systems biology into clinical trials accelerates understanding of diseases.

Authors:  Bibiana Bielekova; Yoram Vodovotz; Gary An; John Hallenbeck
Journal:  Front Neurol       Date:  2014-06-27       Impact factor: 4.003

  8 in total

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