Literature DB >> 17235581

Dispersion relation in oscillatory reaction-diffusion systems with self-consistent flow in true slime mold.

H Yamada1, T Nakagaki, R E Baker, P K Maini.   

Abstract

In the large amoeboid organism Physarum, biochemical oscillators are spatially distributed throughout the organism and their collective motion exhibits phase waves, which carry physiological signals. The basic nature of this wave behaviour is not well-understood because, to date, an important effect has been neglected, namely, the shuttle streaming of protoplasm which accompanies the biochemical rhythms. Here we study the effects of self-consistent flow on the wave behaviour of oscillatory reaction-diffusion models proposed for the Physarum plasmodium, by means of numerical simulation for the dispersion relation and weakly nonlinear analysis for derivation of the phase equation. We conclude that the flow term is able to increase the speed of phase waves (similar to elongation of wave length). We compare the theoretical consequences with real waves observed in the organism and also point out the physiological roles of these effects on control mechanisms of intracellular communication.

Entities:  

Mesh:

Year:  2007        PMID: 17235581     DOI: 10.1007/s00285-006-0067-1

Source DB:  PubMed          Journal:  J Math Biol        ISSN: 0303-6812            Impact factor:   2.164


  8 in total

1.  Mathematical model for rhythmic protoplasmic movement in the true slime mold.

Authors:  Ryo Kobayashi; Atsushi Tero; Toshiyuki Nakagaki
Journal:  J Math Biol       Date:  2006-06-13       Impact factor: 2.259

2.  Modulation of cellular rhythm and photoavoidance by oscillatory irradiation in the Physarum plasmodium.

Authors:  T Nakagaki; H Yamada; T Ueda
Journal:  Biophys Chem       Date:  1999-11-15       Impact factor: 2.352

3.  Interaction between cell shape and contraction pattern in the Physarum plasmodium.

Authors:  T Nakagaki; H Yamada; T Ueda
Journal:  Biophys Chem       Date:  2000-05-15       Impact factor: 2.352

4.  Simple chemical reaction systems with limit cycle behaviour.

Authors:  J Schnakenberg
Journal:  J Theor Biol       Date:  1979-12-07       Impact factor: 2.691

5.  Reaction-diffusion-advection model for pattern formation of rhythmic contraction in a giant amoeboid cell of the physarum plasmodium

Authors: 
Journal:  J Theor Biol       Date:  1999-04-21       Impact factor: 2.691

6.  Spatial and temporal organization of intracellular adenine nucleotides and cyclic nucleotides in relation to rhythmic motility in Physarum plasmodium.

Authors:  T Ueda; K Matsumoto; T Akitaya; Y Kobatake
Journal:  Exp Cell Res       Date:  1986-02       Impact factor: 3.905

7.  Simultaneous oscillations of Ca2+ efflux and tension generation in the permealized plasmodial strand of Physarum.

Authors:  Y Yoshimoto; F Matsumura; N Kamiya
Journal:  Cell Motil       Date:  1981

8.  ATP- and calcium-controlled contraction in a saponin model of Physarum polycephalum.

Authors:  Y Yoshimoto; N Kamiya
Journal:  Cell Struct Funct       Date:  1984-06       Impact factor: 2.212

  8 in total
  3 in total

1.  Wavespeed in reaction-diffusion systems, with applications to chemotaxis and population pressure.

Authors:  Sanjeeva Balasuriya; Georg A Gottwald
Journal:  J Math Biol       Date:  2009-11-05       Impact factor: 2.259

2.  Physarum machines: encapsulating reaction-diffusion to compute spanning tree.

Authors:  Andrew Adamatzky
Journal:  Naturwissenschaften       Date:  2007-06-29

3.  An active poroelastic model for mechanochemical patterns in protoplasmic droplets of Physarum polycephalum.

Authors:  Markus Radszuweit; Harald Engel; Markus Bär
Journal:  PLoS One       Date:  2014-06-13       Impact factor: 3.240

  3 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.