Literature DB >> 17233752

Environmental distribution of the trichloroethene reductive dehalogenase gene (tceA) suggests lateral gene transfer among Dehalococcoides.

Rosa Krajmalnik-Brown1, Youlboong Sung, Kirsti M Ritalahti, F Michael Saunders, Frank E Löffler.   

Abstract

The trichloroethene reductive dehalogenase gene (tceA) of Dehalococcoides spp. was detected in 12 of 21 trichloroethene-to-ethene dechlorinating enrichment cultures established from aquifer and sediment samples collected from diverse geographic locations in the USA. Analysis of the tceA chromosomal regions indicated that the tceA genes shared greater than 95% sequence identity, and all shared identical tceAB spacer sequences and tceB genes downstream of tceA. A putative transposable element (PTE) was present 1077 bp downstream of the tceB stop codon in three of eight chromosomal regions analyzed. Sequence identity was interrupted downstream of tceB and upstream or downstream of the PTE, suggesting that intrachromosomal or interchromosomal transfer of tceAB had occurred.

Entities:  

Mesh：

Substances：

Year:  2007        PMID： 17233752     DOI： 10.1111/j.1574-6941.2006.00243.x

Source DB:  PubMed          Journal:  FEMS Microbiol Ecol        ISSN： 0168-6496            Impact factor:   4.194


  15 in total

1.  Comparative genomics of "Dehalococcoides ethenogenes" 195 and an enrichment culture containing unsequenced "Dehalococcoides" strains.

Authors:  Kimberlee A West; David R Johnson; Ping Hu; Todd Z DeSantis; Eoin L Brodie; Patrick K H Lee; Helene Feil; Gary L Andersen; Stephen H Zinder; Lisa Alvarez-Cohen
Journal:  Appl Environ Microbiol       Date:  2008-03-21       Impact factor: 4.792

2.  Characterization of the community structure of a dechlorinating mixed culture and comparisons of gene expression in planktonic and biofloc-associated "Dehalococcoides" and Methanospirillum species.

Authors:  Annette R Rowe; Brendan J Lazar; Robert M Morris; Ruth E Richardson
Journal:  Appl Environ Microbiol       Date:  2008-09-05       Impact factor: 4.792

3.  Quantitative PCR for tracking the megaplasmid-borne biodegradation potential of a model sphingomonad.

Authors:  Erica M Hartmann; Jonathan P Badalamenti; Rosa Krajmalnik-Brown; Rolf U Halden
Journal:  Appl Environ Microbiol       Date:  2012-04-06       Impact factor: 4.792

4.  Single-nucleotide primer extension assay for detection and sequence typing of "Dehalococcoides" spp.

Authors:  Marcell Nikolausz; Antonis Chatzinotas; Márton Palatinszky; Gwenaël Imfeld; Paula Martinez; Matthias Kästner
Journal:  Appl Environ Microbiol       Date:  2007-11-09       Impact factor: 4.792

5.  Characterizing the metabolism of Dehalococcoides with a constraint-based model.

Authors:  M Ahsanul Islam; Elizabeth A Edwards; Radhakrishnan Mahadevan
Journal:  PLoS Comput Biol       Date:  2010-08-19       Impact factor: 4.475

6.  Expression of reductive dehalogenase genes in Dehalococcoides ethenogenes strain 195 growing on tetrachloroethene, trichloroethene, or 2,3-dichlorophenol.

Authors:  Jennifer M Fung; Robert M Morris; Lorenz Adrian; Stephen H Zinder
Journal:  Appl Environ Microbiol       Date:  2007-05-18       Impact factor: 4.792

7.  Identification and environmental distribution of dcpA, which encodes the reductive dehalogenase catalyzing the dichloroelimination of 1,2-dichloropropane to propene in organohalide-respiring chloroflexi.

Authors:  Elizabeth Padilla-Crespo; Jun Yan; Cynthia Swift; Darlene D Wagner; Karuna Chourey; Robert L Hettich; Kirsti M Ritalahti; Frank E Löffler
Journal:  Appl Environ Microbiol       Date:  2013-11-15       Impact factor: 4.792

8.  Site-specific mobilization of vinyl chloride respiration islands by a mechanism common in Dehalococcoides.

Authors:  Paul J McMurdie; Laura A Hug; Elizabeth A Edwards; Susan Holmes; Alfred M Spormann
Journal:  BMC Genomics       Date:  2011-06-02       Impact factor: 3.969

9.  Complete genome sequence of Dehalogenimonas lykanthroporepellens type strain (BL-DC-9(T)) and comparison to "Dehalococcoides" strains.

Authors:  Shivakumara Siddaramappa; Jean F Challacombe; Susana F Delano; Lance D Green; Hajnalka Daligault; David Bruce; Chris Detter; Roxanne Tapia; Shunsheng Han; Lynne Goodwin; James Han; Tanja Woyke; Sam Pitluck; Len Pennacchio; Matt Nolan; Miriam Land; Yun-Juan Chang; Nikos C Kyrpides; Galina Ovchinnikova; Loren Hauser; Alla Lapidus; Jun Yan; Kimberly S Bowman; Milton S da Costa; Fred A Rainey; William M Moe
Journal:  Stand Genomic Sci       Date:  2012-05-15

Review 10.  Overview of organohalide-respiring bacteria and a proposal for a classification system for reductive dehalogenases.

Authors:  Laura A Hug; Farai Maphosa; David Leys; Frank E Löffler; Hauke Smidt; Elizabeth A Edwards; Lorenz Adrian
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2013-03-11       Impact factor: 6.237
View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.