Literature DB >> 17230197

Dynamic genome architecture in the nuclear space: regulation of gene expression in three dimensions.

Christian Lanctôt1, Thierry Cheutin, Marion Cremer, Giacomo Cavalli, Thomas Cremer.   

Abstract

The regulation of gene expression is mediated by interactions between chromatin and protein complexes. The importance of where and when these interactions take place in the nucleus is currently a subject of intense investigation. Increasing evidence indicates that gene activation or silencing is often associated with repositioning of the locus relative to nuclear compartments and other genomic loci. At the same time, however, structural constraints impose limits on chromatin mobility. Understanding how the dynamic nature of the positioning of genetic material in the nuclear space and the higher-order architecture of the nucleus are integrated is therefore essential to our overall understanding of gene regulation.

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Year:  2007        PMID: 17230197     DOI: 10.1038/nrg2041

Source DB:  PubMed          Journal:  Nat Rev Genet        ISSN: 1471-0056            Impact factor:   53.242


  354 in total

1.  Functional nuclear topography of transcriptionally inducible extra-chromosomal transgene clusters.

Authors:  Manja Meggendorfer; Claudia Weierich; Horst Wolff; Ruth Brack-Werner; Thomas Cremer
Journal:  Chromosome Res       Date:  2010-06-08       Impact factor: 5.239

2.  Specific positioning of the casein gene cluster in active nuclear domains in luminal mammary epithelial cells.

Authors:  Clémence Kress; Kiên Kiêu; Stéphanie Droineau; Laurent Galio; Eve Devinoy
Journal:  Chromosome Res       Date:  2011-10-27       Impact factor: 5.239

Review 3.  Chromosome organization and dynamics during interphase, mitosis, and meiosis in plants.

Authors:  Choon-Lin Tiang; Yan He; Wojciech P Pawlowski
Journal:  Plant Physiol       Date:  2011-11-17       Impact factor: 8.340

Review 4.  Metazoan promoters: emerging characteristics and insights into transcriptional regulation.

Authors:  Boris Lenhard; Albin Sandelin; Piero Carninci
Journal:  Nat Rev Genet       Date:  2012-03-06       Impact factor: 53.242

5.  Changes in chromatin compaction during the cell cycle revealed by micrometer-scale measurement of molecular flow in the nucleus.

Authors:  Elizabeth Hinde; Francesco Cardarelli; Michelle A Digman; Enrico Gratton
Journal:  Biophys J       Date:  2012-02-07       Impact factor: 4.033

6.  Spatial coordination between cell and nuclear shape within micropatterned endothelial cells.

Authors:  Marie Versaevel; Thomas Grevesse; Sylvain Gabriele
Journal:  Nat Commun       Date:  2012-02-14       Impact factor: 14.919

7.  Dynamical modeling of three-dimensional genome organization in interphase budding yeast.

Authors:  Naoko Tokuda; Tomoki P Terada; Masaki Sasai
Journal:  Biophys J       Date:  2012-01-18       Impact factor: 4.033

Review 8.  The nuclear envelope as a chromatin organizer.

Authors:  Nikolaj Zuleger; Michael I Robson; Eric C Schirmer
Journal:  Nucleus       Date:  2011-09-01       Impact factor: 4.197

9.  Higher-order genomic organization in pluripotent stem cells.

Authors:  Ping Wang; Weiqi Zhang; Jiping Yang; Jing Qu; Guang-Hui Liu
Journal:  Protein Cell       Date:  2012-07       Impact factor: 14.870

10.  In vivo pair correlation analysis of EGFP intranuclear diffusion reveals DNA-dependent molecular flow.

Authors:  Elizabeth Hinde; Francesco Cardarelli; Michelle A Digman; Enrico Gratton
Journal:  Proc Natl Acad Sci U S A       Date:  2010-09-07       Impact factor: 11.205

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