Literature DB >> 17229854

Mutated G4P[8] rotavirus associated with a nationwide outbreak of gastroenteritis in Nicaragua in 2005.

Filemon Bucardo1, Beatrice Karlsson, Johan Nordgren, Margarita Paniagua, Alcides González, Juan Jose Amador, Felix Espinoza, Lennart Svensson.   

Abstract

During February and March 2005, one of the largest national recorded outbreaks of severe acute gastroenteritis occurred in Nicaragua, affecting >or=64,000 individuals and causing >or=56 deaths, predominantly in children under 5 years of age. Through a nationwide laboratory-based study, stool samples were collected and investigated for rotavirus. Of 108 stool samples examined, 72 (67%) were positive for rotavirus. While 69% (50/72) of the positive samples were found in children less than 2 years of age, 50% (6/12) of the adult samples were positive. A mutated G4P[8] strain was the most commonly recognized strain (85%), followed by mixed G strains (8%) and G9P[8] (7%) strains. Phylogenetic analysis of the VP7 gene revealed that the G4 strains belonged to the emerging lineage Ic and was distantly related to the ST3 and VA70 G4 strains. Secondary structure predictions of the VP7 G4 protein revealed an insert of an asparagine residue in position 76, which, combined with additional mutations, surprisingly modified two downstream beta-sheets at amino acid positions 80 to 85 and 115 to 119. The 2005 G4P[8] strain compared to a G4P[8] strain from 2002 had a substitution of an asparagine residue for threonine (Asn-->Thr) at position 96 within antigenic region A, thus eliminating a potential glycosylation site. The mutated G4 virus was introduced in Nicaragua after 2002 and probably emerged from Brazil, Argentina, or Uruguay.

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Year:  2007        PMID: 17229854      PMCID: PMC1829148          DOI: 10.1128/JCM.01992-06

Source DB:  PubMed          Journal:  J Clin Microbiol        ISSN: 0095-1137            Impact factor:   5.948


  32 in total

1.  Amino acid substitution within the VP7 protein of G2 rotavirus strains associated with failure to serotype.

Authors:  M I Gómara; D Cubitt; U Desselberger; J Gray
Journal:  J Clin Microbiol       Date:  2001-10       Impact factor: 5.948

2.  South African G4P[6] asymptomatic and symptomatic neonatal rotavirus strains differ in their NSP4, VP8*, and VP7 genes.

Authors:  C T Pager; J J Alexander; A D Steele
Journal:  J Med Virol       Date:  2000-10       Impact factor: 2.327

3.  Characterization of serotype G9 rotavirus strains isolated in the United States and India from 1993 to 2001.

Authors:  A R Laird; J R Gentsch; T Nakagomi; O Nakagomi; R I Glass
Journal:  J Clin Microbiol       Date:  2003-07       Impact factor: 5.948

4.  Genetic and antigenic characterization of rotavirus serotype G9 strains isolated in Australia between 1997 and 2001.

Authors:  Carl Kirkwood; Nada Bogdanovic-Sakran; Enzo Palombo; Paul Masendycz; Helen Bugg; Graeme Barnes; Ruth Bishop
Journal:  J Clin Microbiol       Date:  2003-08       Impact factor: 5.948

5.  Molecular epidemiology of human group A rotavirus infections in the United Kingdom between 1995 and 1998.

Authors:  M Iturriza-Gómara; J Green; D W Brown; M Ramsay; U Desselberger; J J Gray
Journal:  J Clin Microbiol       Date:  2000-12       Impact factor: 5.948

6.  Genetic variation of capsid protein VP7 in genotype g4 human rotavirus strains: simultaneous emergence and spread of different lineages in Argentina.

Authors:  Karin Bok; David O Matson; Jorge A Gomez
Journal:  J Clin Microbiol       Date:  2002-06       Impact factor: 5.948

7.  Detection, subgroup specificity, and genotype diversity of rotavirus strains in children with acute diarrhea in Paraguay.

Authors:  Norma Coluchi; Veridiana Munford; Julio Manzur; Cynthia Vazquez; Mabel Escobar; Ernesto Weber; Perla Mármol; Maria Lucia Rácz
Journal:  J Clin Microbiol       Date:  2002-05       Impact factor: 5.948

8.  Winter seasonality and rotavirus diarrhoea in adults.

Authors:  H Nakajima; T Nakagomi; T Kamisawa; N Sakaki; K Muramoto; T Mikami; H Nara; O Nakagomi
Journal:  Lancet       Date:  2001-06-16       Impact factor: 79.321

9.  Characterization of rotavirus infection in a hospital neonatal unit in Pretoria, South Africa.

Authors:  Duncan Steele; Emmy Reynecke; Mariet de Beer; Pieter Bos; Izelle Smuts
Journal:  J Trop Pediatr       Date:  2002-06       Impact factor: 1.165

10.  Global illness and deaths caused by rotavirus disease in children.

Authors:  Umesh D Parashar; Erik G Hummelman; Joseph S Bresee; Mark A Miller; Roger I Glass
Journal:  Emerg Infect Dis       Date:  2003-05       Impact factor: 6.883

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  13 in total

1.  Evidence of VP7 and VP4 intra-lineage diversification in G4P[8] Italian human rotaviruses.

Authors:  Maria Cristina Medici; Fabio Tummolo; Paola Guerra; Maria Cristina Arcangeletti; Carlo Chezzi; Flora De Conto; Adriana Calderaro
Journal:  Virus Genes       Date:  2013-12-19       Impact factor: 2.332

2.  Clinical and molecular observations of two fatal cases of rotavirus-associated enteritis in children in Italy.

Authors:  Maria Cristina Medici; Laura Anna Abelli; Monica Martinelli; Domenico Corradi; Icilio Dodi; Fabio Tummolo; Valeria Albonetti; Vito Martella; Giuseppe Dettori; Carlo Chezzi
Journal:  J Clin Microbiol       Date:  2011-04-27       Impact factor: 5.948

3.  Whole genome analyses of G1P[8] rotavirus strains from vaccinated and non-vaccinated South African children presenting with diarrhea.

Authors:  Nonkululeko B Magagula; Mathew D Esona; Martin M Nyaga; Karla M Stucker; Rebecca A Halpin; Timothy B Stockwell; Mapaseka L Seheri; A Duncan Steele; David E Wentworth; M Jeffrey Mphahlele
Journal:  J Med Virol       Date:  2014-05-20       Impact factor: 2.327

4.  Both Lewis and secretor status mediate susceptibility to rotavirus infections in a rotavirus genotype-dependent manner.

Authors:  Johan Nordgren; Sumit Sharma; Filemon Bucardo; Waqas Nasir; Gökçe Günaydın; Djeneba Ouermi; Leon W Nitiema; Sylvia Becker-Dreps; Jacques Simpore; Lennart Hammarström; Göran Larson; Lennart Svensson
Journal:  Clin Infect Dis       Date:  2014-08-05       Impact factor: 9.079

5.  Novel light-upon-extension real-time PCR assay for simultaneous detection, quantification, and genogrouping of group A rotavirus.

Authors:  Johan Nordgren; Filemón Bucardo; Lennart Svensson; Per-Eric Lindgren
Journal:  J Clin Microbiol       Date:  2010-03-10       Impact factor: 5.948

6.  Pediatric norovirus diarrhea in Nicaragua.

Authors:  Filemon Bucardo; Johan Nordgren; Beatrice Carlsson; Margarita Paniagua; Per-Eric Lindgren; Felix Espinoza; Lennart Svensson
Journal:  J Clin Microbiol       Date:  2008-06-18       Impact factor: 5.948

7.  Low prevalence of rotavirus and high prevalence of norovirus in hospital and community wastewater after introduction of rotavirus vaccine in Nicaragua.

Authors:  Filemón Bucardo; Per-Eric Lindgren; Lennart Svensson; Johan Nordgren
Journal:  PLoS One       Date:  2011-10-07       Impact factor: 3.240

8.  Emergence of unusual G6P[6] rotaviruses in children, Burkina Faso, 2009-2010.

Authors:  Johan Nordgren; Leon W Nitiema; Sumit Sharma; Djeneba Ouermi; Alfred S Traore; Jacques Simpore; Lennart Svensson
Journal:  Emerg Infect Dis       Date:  2012-04       Impact factor: 6.883

9.  Surveillance of adenoviruses and noroviruses in European recreational waters.

Authors:  A Peter Wyn-Jones; Annalaura Carducci; Nigel Cook; Martin D'Agostino; Maurizio Divizia; Jens Fleischer; Christophe Gantzer; Andrew Gawler; Rosina Girones; Christiane Höller; Ana Maria de Roda Husman; David Kay; Iwona Kozyra; Juan López-Pila; Michele Muscillo; Maria São José Nascimento; George Papageorgiou; Saskia Rutjes; Jane Sellwood; Regine Szewzyk; Mark Wyer
Journal:  Water Res       Date:  2010-10-29       Impact factor: 11.236

10.  Therapeutics Insight with Inclusive Immunopharmacology Explication of Human Rotavirus A for the Treatment of Diarrhea.

Authors:  Mohammad Uzzal Hossain; Abu Hashem; Chaman Ara Keya; Md Salimullah
Journal:  Front Pharmacol       Date:  2016-06-23       Impact factor: 5.810

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