Literature DB >> 17229847

Replication is required for the RecA localization response to DNA damage in Bacillus subtilis.

Lyle A Simmons1, Alan D Grossman, Graham C Walker.   

Abstract

In both prokaryotes and eukaryotes, proteins involved in DNA repair often organize into multicomponent complexes that can be visualized as foci in living cells. We used a RecA-GFP fusion to examine the subcellular cues that direct RecA-GFP to assemble as foci in response to DNA damage. We used two different methods to inhibit initiation of DNA replication and determined that DNA replication is required for the cell to establish RecA-GFP foci after exposure to DNA-damaging agents. Furthermore, use of endonuclease cleavage to generate a site-specific double-strand break demonstrated that the replication machinery (replisome) and DNA synthesis are required for assembly of RecA-GFP foci during repair of a double-strand break. We monitored the cellular levels of RecA and found that focus formation does not require further induction of protein levels, suggesting that foci result from a redistribution of existing protein to sites of damage encountered by the replisome. Taken together, our results support the model that existing RecA protein is recruited to ssDNA generated by the replisome at sites of DNA damage. These results provide insight into the mechanisms that the cell uses to recruit repair proteins to damaged DNA in living cells.

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Year:  2007        PMID: 17229847      PMCID: PMC1783139          DOI: 10.1073/pnas.0607123104

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  53 in total

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  36 in total

1.  Mutations in the Bacillus subtilis beta clamp that separate its roles in DNA replication from mismatch repair.

Authors:  Nicole M Dupes; Brian W Walsh; Andrew D Klocko; Justin S Lenhart; Heather L Peterson; David A Gessert; Cassie E Pavlick; Lyle A Simmons
Journal:  J Bacteriol       Date:  2010-05-07       Impact factor: 3.490

2.  Mismatch repair causes the dynamic release of an essential DNA polymerase from the replication fork.

Authors:  Andrew D Klocko; Jeremy W Schroeder; Brian W Walsh; Justin S Lenhart; Margery L Evans; Lyle A Simmons
Journal:  Mol Microbiol       Date:  2011-09-30       Impact factor: 3.501

3.  Multiple Ku orthologues mediate DNA non-homologous end-joining in the free-living form and during chronic infection of Sinorhizobium meliloti.

Authors:  Hajime Kobayashi; Lyle A Simmons; Daniel S Yuan; William J Broughton; Graham C Walker
Journal:  Mol Microbiol       Date:  2007-12-07       Impact factor: 3.501

4.  Anticipating chromosomal replication fork arrest: SSB targets repair DNA helicases to active forks.

Authors:  François Lecointe; Céline Sérèna; Marion Velten; Audrey Costes; Stephen McGovern; Jean-Christophe Meile; Jeffrey Errington; S Dusko Ehrlich; Philippe Noirot; Patrice Polard
Journal:  EMBO J       Date:  2007-09-13       Impact factor: 11.598

Review 5.  DNA damage responses in prokaryotes: regulating gene expression, modulating growth patterns, and manipulating replication forks.

Authors:  Kenneth N Kreuzer
Journal:  Cold Spring Harb Perspect Biol       Date:  2013-11-01       Impact factor: 10.005

6.  DnaN clamp zones provide a platform for spatiotemporal coupling of mismatch detection to DNA replication.

Authors:  Justin S Lenhart; Anushi Sharma; Manju M Hingorani; Lyle A Simmons
Journal:  Mol Microbiol       Date:  2012-12-11       Impact factor: 3.501

Review 7.  Regulation of Cell Division in Bacteria by Monitoring Genome Integrity and DNA Replication Status.

Authors:  Peter E Burby; Lyle A Simmons
Journal:  J Bacteriol       Date:  2020-01-02       Impact factor: 3.490

8.  Beta clamp directs localization of mismatch repair in Bacillus subtilis.

Authors:  Lyle A Simmons; Bryan W Davies; Alan D Grossman; Graham C Walker
Journal:  Mol Cell       Date:  2008-02-15       Impact factor: 17.970

9.  Imaging mismatch repair and cellular responses to DNA damage in Bacillus subtilis.

Authors:  Andrew D Klocko; Kaleena M Crafton; Brian W Walsh; Justin S Lenhart; Lyle A Simmons
Journal:  J Vis Exp       Date:  2010-02-08       Impact factor: 1.355

10.  Co-orientation of replication and transcription preserves genome integrity.

Authors:  Anjana Srivatsan; Ashley Tehranchi; David M MacAlpine; Jue D Wang
Journal:  PLoS Genet       Date:  2010-01-15       Impact factor: 5.917

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