Literature DB >> 29081510

Isolation and characterization of urinary extracellular vesicles: implications for biomarker discovery.

Michael L Merchant1, Ilse M Rood2, Jeroen K J Deegens2, Jon B Klein1,3.   

Abstract

Urine is a valuable diagnostic medium and, with the discovery of urinary extracellular vesicles, is viewed as a dynamic bioactive fluid. Extracellular vesicles are lipid-enclosed structures that can be classified into three categories: exosomes, microvesicles (or ectosomes) and apoptotic bodies. This classification is based on the mechanisms by which membrane vesicles are formed: fusion of multivesicular bodies with the plasma membranes (exosomes), budding of vesicles directly from the plasma membrane (microvesicles) or those shed from dying cells (apoptotic bodies). During their formation, urinary extracellular vesicles incorporate various cell-specific components (proteins, lipids and nucleic acids) that can be transferred to target cells. The rigour needed for comparative studies has fueled the search for optimal approaches for their isolation, purification, and characterization. RNA, the newest extracellular vesicle component to be discovered, has received substantial attention as an extracellular vesicle therapeutic, and compelling evidence suggests that ex vivo manipulation of microRNA composition may have uses in the treatment of kidney disorders. The results of these studies are building the case that urinary extracellular vesicles act as mediators of renal pathophysiology. As the field of extracellular vesicle studies is burgeoning, this Review focuses on primary data obtained from studies of human urine rather than on data from studies of laboratory animals or cultured immortalized cells.

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Year:  2017        PMID: 29081510      PMCID: PMC5941934          DOI: 10.1038/nrneph.2017.148

Source DB:  PubMed          Journal:  Nat Rev Nephrol        ISSN: 1759-5061            Impact factor:   28.314


  170 in total

1.  A multiplex quantitative proteomics strategy for protein biomarker studies in urinary exosomes.

Authors:  Delfin A A Raj; Immacolata Fiume; Giovambattista Capasso; Gabriella Pocsfalvi
Journal:  Kidney Int       Date:  2012-03-14       Impact factor: 10.612

2.  Urinary exosomes: is there a future?

Authors:  Patricia Gonzales; Trairak Pisitkun; Mark A Knepper
Journal:  Nephrol Dial Transplant       Date:  2008-03-01       Impact factor: 5.992

3.  Comparison of serum exosome isolation methods for microRNA profiling.

Authors:  Kadri Rekker; Merli Saare; Anne Mari Roost; Anna-Liisa Kubo; Natasa Zarovni; Antonio Chiesi; Andres Salumets; Maire Peters
Journal:  Clin Biochem       Date:  2013-10-29       Impact factor: 3.281

4.  Proteomic characterization of thymocyte-derived microvesicles and apoptotic bodies in BALB/c mice.

Authors:  Lilla Turiák; Petra Misják; Tamás G Szabó; Borbála Aradi; Krisztina Pálóczi; Oliver Ozohanics; László Drahos; Agnes Kittel; András Falus; Edit I Buzás; Károly Vékey
Journal:  J Proteomics       Date:  2011-05-19       Impact factor: 4.044

5.  Activated platelets release two types of membrane vesicles: microvesicles by surface shedding and exosomes derived from exocytosis of multivesicular bodies and alpha-granules.

Authors:  H F Heijnen; A E Schiel; R Fijnheer; H J Geuze; J J Sixma
Journal:  Blood       Date:  1999-12-01       Impact factor: 22.113

6.  Mast cell- and dendritic cell-derived exosomes display a specific lipid composition and an unusual membrane organization.

Authors:  Karine Laulagnier; Claude Motta; Safouane Hamdi; Sébastien Roy; Florence Fauvelle; Jean-François Pageaux; Toshihide Kobayashi; Jean-Pierre Salles; Bertrand Perret; Christian Bonnerot; Michel Record
Journal:  Biochem J       Date:  2004-05-15       Impact factor: 3.857

7.  Isolation of urinary extracellular vesicles from Tamm- Horsfall protein-depleted urine and their application in the development of a lectin-exosome-binding assay.

Authors:  Maja Kosanović; Miroslava Janković
Journal:  Biotechniques       Date:  2014-09-01       Impact factor: 1.993

8.  CD2AP mRNA in urinary exosome as biomarker of kidney disease.

Authors:  Lin-Li Lv; Yu-Han Cao; Ming-Ming Pan; Hong Liu; Ri-Ning Tang; Kun-Ling Ma; Ping-Sheng Chen; Bi-Cheng Liu
Journal:  Clin Chim Acta       Date:  2013-10-18       Impact factor: 3.786

9.  EVpedia: an integrated database of high-throughput data for systemic analyses of extracellular vesicles.

Authors:  Dae-Kyum Kim; Byeongsoo Kang; Oh Youn Kim; Dong-Sic Choi; Jaewook Lee; Sae Rom Kim; Gyeongyun Go; Yae Jin Yoon; Ji Hyun Kim; Su Chul Jang; Kyong-Su Park; Eun-Jeong Choi; Kwang Pyo Kim; Dominic M Desiderio; Yoon-Keun Kim; Jan Lötvall; Daehee Hwang; Yong Song Gho
Journal:  J Extracell Vesicles       Date:  2013-03-19

10.  Standardization of sample collection, isolation and analysis methods in extracellular vesicle research.

Authors:  Kenneth W Witwer; Edit I Buzás; Lynne T Bemis; Adriana Bora; Cecilia Lässer; Jan Lötvall; Esther N Nolte-'t Hoen; Melissa G Piper; Sarada Sivaraman; Johan Skog; Clotilde Théry; Marca H Wauben; Fred Hochberg
Journal:  J Extracell Vesicles       Date:  2013-05-27
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  109 in total

1.  Urinary Extracellular Vesicles Magic Particles for Biomarker Discovery.

Authors:  Karina Barreiro; Tobias B Huber; Harry Holthofer
Journal:  Adv Exp Med Biol       Date:  2021       Impact factor: 2.622

2.  Current Methods for the Isolation of Urinary Extracellular Vesicles.

Authors:  Serena Maggio; Emanuela Polidori; Paola Ceccaroli; Andrea Cioccoloni; Vilberto Stocchi; Michele Guescini
Journal:  Methods Mol Biol       Date:  2021

Review 3.  The Urothelium: Life in a Liquid Environment.

Authors:  Marianela G Dalghi; Nicolas Montalbetti; Marcelo D Carattino; Gerard Apodaca
Journal:  Physiol Rev       Date:  2020-03-19       Impact factor: 37.312

4.  Extracellular vesicles as novel biomarkers and pharmaceutic targets of diseases.

Authors:  Yanfang Chen; Yaoliang Tang; Guo-Chang Fan; Dayue Darrel Duan
Journal:  Acta Pharmacol Sin       Date:  2018-04       Impact factor: 6.150

5.  The Authors Reply.

Authors:  Lin-Li Lv; Ye Feng; Bi-Cheng Liu
Journal:  J Am Soc Nephrol       Date:  2018-04-25       Impact factor: 10.121

6.  [Construction and application of a magnetic and catalytic hairpin assembly-based platform for detecting dual membrane proteins on exosomes].

Authors:  Xianhua Chen; Weilun Pan; Bo Li; Lei Zheng
Journal:  Nan Fang Yi Ke Da Xue Xue Bao       Date:  2019-12-30

Review 7.  The biological functions and clinical applications of exosomes in lung cancer.

Authors:  Rui Chen; Xin Xu; Zijun Qian; Congcong Zhang; Yongjie Niu; Zhixian Wang; Jianli Sun; Xiao Zhang; Yongchun Yu
Journal:  Cell Mol Life Sci       Date:  2019-07-27       Impact factor: 9.261

8.  Extracellular vesicles as a novel diagnostic and research tool for patients with HTN and kidney disease.

Authors:  Uta Erdbrügger; Thu H Le
Journal:  Am J Physiol Renal Physiol       Date:  2019-07-17

9.  Optimization of urinary small extracellular vesicle isolation protocols: implications in early diagnosis, stratification, treatment and prognosis of diseases in the era of personalized medicine.

Authors:  Qing-Gen Chen; Lian Chen; Qiong-Hui Zhong; Lei Zhang; Yu-Huan Jiang; Shu-Qi Li; Ting-Yu Qin; Fan Sun; Xia-Hong You; Wei-Ming Yang; Bo Huang; Xiao-Zhong Wang
Journal:  Am J Transl Res       Date:  2020-10-15       Impact factor: 4.060

Review 10.  Molecular stratification of idiopathic nephrotic syndrome.

Authors:  Moin A Saleem
Journal:  Nat Rev Nephrol       Date:  2019-10-25       Impact factor: 28.314

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